RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FAHD2BQ6P2I3 314 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-224ENST00000494132 SLC16A9Q7RTY1 509 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 RFLNBQ8N5W9 214 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 SGK3Q96BR1 496 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 FAHD2AQ96GK7 314 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 REEP6Q96HR9 211 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 IL4I1Q96RQ9 567 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 PKP2Q99959 881 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
ATG4B-224ENST00000494132 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 PPP1R3EQ9H7J1 279 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 PCDHB10Q9UN67 800 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 ZAR1LA6NP61 321 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 PRR32B1ATL7 298 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 XRCC2O43543 280 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 IFNA2P01563 188 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
ATG4B-224ENST00000494132 RAD23AP54725 363 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 ACTR3P61158 418 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 MPPED2Q15777 294 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-224ENST00000494132 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-224ENST00000494132 PGAM5Q96HS1 289 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 TEAD3Q99594 435 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 RIBC2Q9H4K1 309 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 LAMP5Q9UJQ1 280 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
ATG4B-224ENST00000494132 TRAV20A0A0B4J274 112 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 H3BNX3 289 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 EBAG9O00559 213 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 FAM20BO75063 409 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 AVPP01185 164 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 ALOX5APP20292 161 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 ZFP36P26651 326 aaKnown RBP12.35□□□□□ -0.43
ATG4B-224ENST00000494132 FAM3AP98173 230 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 KRT77Q7Z794 578 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 BOLLQ8N9W6 283 aaKnown RBP12.35□□□□□ -0.43
ATG4B-224ENST00000494132 TMEM163Q8TC26 289 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 G6PC2Q9NQR9 355 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 LRP12Q9Y561 859 aa12.35□□□□□ -0.43
ATG4B-224ENST00000494132 hCG_38984A0A1B0GV85 526 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 A0A1B0GWJ7 208 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 MAGEB4O15481 346 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-224ENST00000494132 ADRA2CP18825 462 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 MDH2P40926 338 aaKnown RBP12.34□□□□□ -0.43
ATG4B-224ENST00000494132 CD200P41217 278 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 ZNF826PQ6ZT77 177 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-224ENST00000494132 KLHL36Q8N4N3 616 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 OR8B12Q8NGG6 310 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 SPSB4Q96A44 273 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 OSBPL10Q9BXB5 764 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 PRRG3Q9BZD7 231 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 OR10A2Q9H208 303 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
ATG4B-224ENST00000494132 MRPL15Q9P015 296 aaKnown RBP12.34□□□□□ -0.43
ATG4B-224ENST00000494132 ATRQ13535 2644 aa12.34□□□□□ -0.43
ATG4B-224ENST00000494132 PPIAL4EA0A075B759 164 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 LOC105371242A0A075B767 164 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 CEACAM18A8MTB9 384 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PHF1O43189 567 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 RGS9O75916 674 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 APOL3O95236 402 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PNPP00491 289 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 APOC1P02654 83 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 GRPP07492 148 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PPIAL4FP0DN26 164 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 IRF2P14316 349 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 ANPEPP15144 967 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PCMT1P22061 227 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PSMA6P60900 246 aaKnown RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 TMEM155Q4W5P6 130 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 AADACL4Q5VUY2 407 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 DCAF12L2Q5VW00 463 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 OR52H1Q8NGJ2 320 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 CNN2Q99439 309 aaKnown RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 TMPRSS13Q9BYE2 586 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 YIPF3Q9GZM5 350 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 METTL17Q9H7H0 456 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 TMEM165Q9HC07 324 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 H2AFY2Q9P0M6 372 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-224ENST00000494132 IKZF2Q9UKS7 526 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 PPIAL4AQ9Y536 164 aa12.33□□□□□ -0.44
ATG4B-224ENST00000494132 A0A0G2JMP0 313 aa12.32□□□□□ -0.44
ATG4B-224ENST00000494132 A0A0X1KG70 313 aa12.32□□□□□ -0.44
ATG4B-224ENST00000494132 A6NLC8 198 aa12.32□□□□□ -0.44
ATG4B-224ENST00000494132 LRRC30A6NM36 301 aa12.32□□□□□ -0.44
ATG4B-224ENST00000494132 ANKRD30BLA7E2S9 258 aa12.32□□□□□ -0.44
ATG4B-224ENST00000494132 EI24O14681 340 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms