RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 POLEQ07864 2286 aa12.27□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF462Q96JM2 2506 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ACOD1A6NK06 481 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 DVL2O14641 736 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 MSTNO14793 375 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 NCR1O76036 304 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ISG15P05161 165 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ANXA2P07355 339 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 DBHP09172 617 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 UBCP0CG48 685 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 SLC2A1P11166 492 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 SLC2A2P11168 524 aaPredicted RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 BMP5P22003 454 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 APEX1P27695 318 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 HOXC12P31275 282 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 CA7P43166 264 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 MTNR1BP49286 362 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 PLP2Q04941 152 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 GSG1Q2KHT4 349 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 Q499Y3 187 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 TMEM244Q5VVB8 128 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 CXorf67Q86X51 503 aaPredicted RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 CPEB3Q8NE35 698 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ACOT12Q8WYK0 555 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 PHYHIPQ92561 330 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 ZC3HAV1LQ96H79 300 aaKnown RBP12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 B3GNT2Q9NY97 397 aa12.27□□□□□ -0.45
PDZRN3-210ENST00000492909 TRBV5-5A0A0J9YX44 114 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 TTRP02766 147 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 COX5BP10606 129 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 MYL9P24844 172 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 MAPK3P27361 379 aaPredicted RBP12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 KIR2DL3P43628 341 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 MAP2K3P46734 347 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM27D1Q5T7N8 215 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 TRIQKQ629K1 86 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF474Q6S9Z5 364 aaPredicted RBP12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM57BQ71RH2 274 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 LUZP2Q86TE4 346 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 C19orf18Q8NEA5 215 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 RND1Q92730 232 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 THRSPQ92748 146 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 DMRTA2Q96SC8 542 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 NOX3Q9HBY0 568 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 MEMO1Q9Y316 297 aa12.26□□□□□ -0.45
PDZRN3-210ENST00000492909 ARPC4-TTLL3A0A0A6YYG9 625 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 LOC107986453A0A1B0GWG9 222 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 EEF1E1-BLOC1S5C9J1V9 151 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 EEF1E1O43324 174 aaKnown RBP12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 UCHL1P09936 223 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 ACSM4P0C7M7 580 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 ACHEP22303 614 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 KRTAP27-1Q3LI81 207 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 PRSS45Q7RTY3 260 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 MRGPRGQ86SM5 289 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 NAA40Q86UY6 237 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 Q8N402 240 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 C17orf78Q8N4C9 275 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 OR8B12Q8NGG6 310 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 OR10AC1Q8NH08 325 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 TSEN15Q8WW01 171 aaKnown RBP12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 PGAM5Q96HS1 289 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 DERL3Q96Q80 235 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 PPIL3Q9H2H8 161 aaKnown RBP12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 NBASA2RRP1 2371 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A1W2PPK0 400 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM172BPA6NC97 362 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 H3BSH0 61 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 P2RY10O00398 339 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 STOMP27105 288 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 HLA-DMAP28067 261 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 RCVRNP35243 200 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 UQCRFS1P47985 274 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 SOX2P48431 317 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 MRPL49Q13405 166 aaKnown RBP12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 IL18Q14116 193 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 P2RY14Q15391 338 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 BHLHA15Q7RTS1 189 aaPredicted RBP12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 MDP1Q86V88 176 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 OR52H1Q8NGJ2 320 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 TMEM106AQ96A25 262 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 DHDHQ9UQ10 334 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms