RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SNRPCP09234 159 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ZGLP1P0C6A0 271 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TBPP20226 339 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 MAOAP21397 527 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 GCAP28676 217 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PYCR1P32322 319 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 CD96P40200 585 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ARL4AP40617 200 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 AVPR1BP47901 424 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ZFP36L2P47974 494 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 MEOX1P50221 254 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PIGPP57054 158 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 MRPS10P82664 201 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 RGS1Q08116 209 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 MYBPHQ13203 477 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 MAD2L1Q13257 205 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 FAM53BQ14153 422 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ATXN7L3Q14CW9 347 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 GUSBP1Q15486 140 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 HLA-DRB5Q30154 266 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF672Q499Z4 452 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 ZFP69Q49AA0 526 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TREML2Q5T2D2 321 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 STEAP4Q687X5 459 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM215Q68D42 235 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 OGFOD2Q6N063 350 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TOMM20LQ6UXN7 152 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 LARP4Q71RC2 724 aaKnown RBP eCLIP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 DEFB128Q7Z7B8 93 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 CLEC14AQ86T13 490 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 DTX2Q86UW9 622 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 SLC35F2Q8IXU6 374 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PRR26Q8N8Z3 221 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 LINC01356Q8N9X3 169 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 OR4E2Q8NGC2 313 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 OR4X1Q8NH49 305 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 GPR119Q8TDV5 335 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TFB1MQ8WVM0 346 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 RBPMSQ93062 196 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 UBE2E3Q969T4 207 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PTX4Q96A99 478 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 CMBLQ96DG6 245 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 BTF3L4Q96K17 158 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PRRG4Q9BZD6 226 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 CIPCQ9C0C6 399 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 SLC25A51Q9H1U9 297 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 OR51J1Q9H342 316 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PTGES2Q9H7Z7 377 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 SLCO1B3Q9NPD5 702 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 STARD5Q9NSY2 213 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM38BQ9NVV0 291 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 LSM7Q9UK45 103 aaKnown RBP3.66□□□□□ -1.82
BRCA1-220ENST00000492859 PHLPP1O60346 1717 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TCOF1Q13428 1488 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 A0A1W2PPI3 338 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 TRAPPC13A5PLN9 417 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM202A6NGA9 273 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 TCP10L2B9ZVM9 353 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 H7C417 338 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 J3KR12 359 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CCL24O00175 119 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CORTO00230 105 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 DVL1O14640 695 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 HMGB3O15347 200 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 RGS16O15492 202 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 FAM189A1O60320 539 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZIC3O60481 467 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 SNX3O60493 162 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 WDR1O75083 606 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 STK16O75716 305 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CDS2O95674 445 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 IL18BPO95998 194 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CRYGDP07320 174 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 SP1P08047 785 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 IL6RP08887 468 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 H2BFMP0C1H6 154 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 UBBP0CG47 229 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 FOLR2P14207 255 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 IRF2P14316 349 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ABOP16442 354 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF37AP17032 561 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MATN1P21941 496 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 DVL1P1P54792 670 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 RIPPLY3P57055 190 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 HILS1P60008 231 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 OSTNP61366 133 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CD164Q04900 197 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 PNRC1Q12796 327 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 PPP1R1AQ13522 171 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 GNMTQ14749 295 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CDSNQ15517 529 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MICAQ29983 383 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF542PQ5EBM4 170 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CLEC12AQ5QGZ9 265 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 AVPI1Q5T686 147 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 AWAT2Q6E213 333 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 LCN10Q6JVE6 187 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 SHC4Q6S5L8 630 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms