RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SPI1P17947 270 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 PGCP20142 388 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 MPGP29372 298 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 GABRA5P31644 462 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 IDH3GP51553 393 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-213ENST00000492506 DVL1P1P54792 670 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-213ENST00000492506 CLDN8P56748 225 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 RAB4BP61018 213 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 TGFBR3Q03167 851 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 PLAURQ03405 335 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 TPBGQ13641 420 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SLC17A1Q14916 467 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 GPR68Q15743 365 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 MAPK14Q16539 360 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 OCLNQ16625 522 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 PTCHD4Q6ZW05 846 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 RHOUQ7L0Q8 258 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 LRRC28Q86X40 367 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SPAG16Q8N0X2 631 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 FTMTQ8N4E7 242 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 OR56B4Q8NH76 319 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 OR5P2Q8WZ92 322 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SLCO1C1Q9NYB5 712 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 UPB1Q9UBR1 384 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SLC9A8Q9Y2E8 581 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 TEX13CA0A0J9YWL9 993 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 TMEM89A2RUT3 159 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 HMSDA8MTL9 139 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 MCIDASD6RGH6 385 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RGS11O94810 467 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RAB36O95755 333 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 C6orf47O95873 294 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 WNT11O96014 354 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RPS26P62854 115 aaKnown RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 PITPNAQ00169 270 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RELQ04864 619 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 PPP1R8Q12972 351 aaKnown RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 GPR176Q14439 515 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RNF212Q495C1 297 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 CDNFQ49AH0 187 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 SLC25A30Q5SVS4 291 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 BCL2L15Q5TBC7 163 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 PYHIN1Q6K0P9 492 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 C5orf46Q6UWT4 87 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 GRINAQ7Z429 371 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 JAZF1Q86VZ6 243 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 SLC30A8Q8IWU4 369 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 ZCCHC24Q8N2G6 241 aaKnown RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 ZIC4Q8N9L1 334 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 OR4C15Q8NGM1 316 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 ORAI1Q96D31 301 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 KATNB1Q9BVA0 655 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 ZNF350Q9GZX5 532 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 SAP130Q9H0E3 1048 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 METTL17Q9H7H0 456 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 PARPBPQ9NWS1 579 aa11.33□□□□□ -0.6
HDAC3-213ENST00000492506 MYEF2Q9P2K5 600 aaKnown RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 SPIN1Q9Y657 262 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-213ENST00000492506 TMEM129A0AVI4 362 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 NAP1L6A6NFF2 107 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 STX11O75558 287 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 HTR3BO95264 441 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 GPX2P18283 190 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 FKBP2P26885 142 aaKnown RBP11.32□□□□□ -0.6
HDAC3-213ENST00000492506 PCGF2P35227 344 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 TSPAN5P62079 268 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 NAAAQ02083 359 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 HGFACQ04756 655 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 GK2Q14410 553 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-213ENST00000492506 HFEQ30201 348 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 ARHGAP11BQ3KRB8 267 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 SPANXN4Q5MJ08 99 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 CD200R1LQ6Q8B3 271 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 C3orf56Q8N813 242 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 OR11H4Q8NGC9 324 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 OR5AK3PQ8NH89 298 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-213ENST00000492506 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
HDAC3-213ENST00000492506 C7orf34Q96L11 122 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
HDAC3-213ENST00000492506 IFT27Q9BW83 186 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 SEC61A2Q9H9S3 476 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 OBP2BQ9NPH6 170 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 SPATA2Q9UM82 520 aa11.32□□□□□ -0.6
HDAC3-213ENST00000492506 SGCEO43556 437 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms