RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 TSSK2Q96PF2 358 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 CCL13Q99616 98 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 FNDC11Q9BVV2 318 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 NDEL1Q9GZM8 345 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 MMP28Q9H239 520 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 NRIP3Q9NQ35 241 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 AURKCQ9UQB9 309 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 MAB21L2Q9Y586 359 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 SNX13Q9Y5W8 968 aa11.14□□□□□ -0.63
CTDSP1-210ENST00000491064 A6NLC8 198 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 SOCS2O14508 198 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 SASH3O75995 380 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 KDELR2P33947 212 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 CDKN2AP42771 156 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 CENPAP49450 140 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 UBE2E1P51965 193 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 SELENOWP63302 87 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 TRAP1Q12931 704 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 ECH1Q13011 328 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 LY6EQ16553 131 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 PCK2Q16822 640 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 WDR38Q5JTN6 314 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 ERICH5Q6P6B1 374 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 CRIP3Q6Q6R5 217 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 LINC00346Q8IVM7 164 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 GPX7Q96SL4 187 aaPredicted RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 PITX2Q99697 317 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 SSX3Q99909 188 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 ATF6BQ99941 703 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 DCTN5Q9BTE1 182 aa11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 PNRC2Q9NPJ4 139 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 MRPL15Q9P015 296 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-210ENST00000491064 IGLV1-36A0A0B4J1U3 117 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 K7EIL1 84 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 FXYD1O00168 92 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 PTP4A3O75365 173 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 FBXO24O75426 580 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 NDUFB2O95178 105 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 ANOS1P23352 680 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 ZNF92Q03936 586 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 EMX1Q04741 257 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 ACSM1Q08AH1 577 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 CYLC2Q14093 348 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 MICBQ29980 383 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 DNM1P34Q6PK57 102 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 TSEN54Q7Z6J9 526 aaKnown RBP11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 SLC26A10Q8NG04 563 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 OR8J3Q8NGG0 315 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 OR2AE1Q8NHA4 323 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 R3HDM4Q96D70 268 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 CLPTM1LQ96KA5 538 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 SH3GL1Q99961 368 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 ADA2Q9NZK5 511 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 SIGLEC7Q9Y286 467 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 IER3IP1Q9Y5U9 82 aa11.12□□□□□ -0.63
CTDSP1-210ENST00000491064 MEGF11A6BM72 1044 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 GGT3PA6NGU5 568 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 M0R135 149 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 ACOT8O14734 319 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 TXNDC12O95881 172 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 IFNW1P05000 195 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 CD28P10747 220 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 CRABP1P29762 137 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 GGT2P36268 569 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 TPTEP56180 551 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 SNAI3Q3KNW1 292 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 VTCN1Q7Z7D3 282 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 C11orf53Q8IXP5 236 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 OR4F17Q8NGA8 305 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 LRRC29Q8WV35 223 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 STON2Q8WXE9 905 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 LZICQ8WZA0 190 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 RORBQ92753 470 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 OR4F4Q96R69 305 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 FAM234AQ9H0X4 552 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 CYB5R1Q9UHQ9 305 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 B9D1Q9UPM9 204 aa11.11□□□□□ -0.63
CTDSP1-210ENST00000491064 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 BHLHE40O14503 412 aa11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 NDUFB3O43676 98 aa11.1□□□□□ -0.63
CTDSP1-210ENST00000491064 AMY2BP19961 511 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms