RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CFAP77Q6ZQR2 320 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF100Q8IYN0 542 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF679Q8IYX0 411 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF611Q8N823 705 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 STEAP2Q8NFT2 490 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 LILRB1Q8NHL6 650 aaPredicted RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 NDNFQ8TB73 568 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM171Q8WVE6 324 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 RNF133Q8WVZ7 376 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 HSD17B8Q92506 261 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 AKAP1Q92667 903 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 NEUROG1Q92886 237 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM203Q969S6 136 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 APH1AQ96BI3 265 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PGLYRP3Q96LB9 341 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 DCLRE1CQ96SD1 692 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 CENPOQ9BU64 300 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TMED9Q9BVK6 235 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF416Q9BWM5 594 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 OR10A4Q9H209 315 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 C1orf198Q9H425 327 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 RNF167Q9H6Y7 350 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 SIAEQ9HAT2 523 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PNRC2Q9NPJ4 139 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM38BQ9NVV0 291 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ASH2LQ9UBL3 628 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PRSS50Q9UI38 385 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 LAMP3Q9UQV4 416 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 POLR1DQ9Y2S0 133 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TRBV2A0A0J9YWF9 115 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 TRDV1A0A1B0GX56 115 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 KIAA1324LA8MWY0 1029 aaPredicted RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF587BE7ETH6 402 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HS3ST1O14792 307 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 RER1O15258 196 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 SRSF10O75494 262 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 KRT33AO76009 404 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 CNOT4O95628 575 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 CD1AP06126 327 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HEXAP06865 529 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 CST2P09228 141 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 B4GALT1P15291 398 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 IL32P24001 234 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 GUCA1AP43080 201 aaPredicted RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 OR3A2P47893 321 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 GDI2P50395 445 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 RIDAP52758 137 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 FOXG1P55316 489 aaPredicted RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HIST1H3AP68431 136 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 ARF1P84077 181 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 ALKBH1Q13686 389 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 P2RY6Q15077 328 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 NCMAPQ5T1S8 102 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HIST2H3PS2Q5TEC6 136 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 OR7E24Q6IFN5 339 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 DEGS2Q6QHC5 323 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM91Q6ZNR0 172 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HIST2H3AQ71DI3 136 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 BHLHA15Q7RTS1 189 aaPredicted RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 KRT77Q7Z794 578 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 PRSS35Q8N3Z0 413 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 OR2AJ1Q8NGZ0 328 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 OR2G2Q8NGZ5 317 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 HAVCR2Q8TDQ0 301 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 GHSRQ92847 366 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 SLAMF6Q96DU3 332 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 SMIM19Q96E16 107 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 FBXO17Q96EF6 278 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 C4orf45Q96LM5 186 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 FOXB1Q99853 325 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 SH3GL3Q99963 347 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 DCUN1D5Q9BTE7 237 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 MROQ9BYG7 248 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 EXOSC4Q9NPD3 245 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 CENPMQ9NSP4 180 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF701Q9NV72 531 aaPredicted RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 TXNL4BQ9NX01 149 aaKnown RBP6.55□□□□□ -1.36
CLDN1-202ENST00000490800 PTTG2Q9NZH5 202 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 UPB1Q9UBR1 384 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 FBXL3Q9UKT7 428 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 SSR3Q9UNL2 185 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 LRP12Q9Y561 859 aa6.55□□□□□ -1.36
CLDN1-202ENST00000490800 NAV3Q8IVL0 2385 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 DNHD1Q96M86 4753 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 DPRXA6NFQ7 191 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 OR4C45A6NMZ5 311 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 GABRPO00591 440 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 GPRIN2O60269 458 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF254O75437 659 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 LYZL6O75951 148 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZFPL1O95159 310 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 PNPP00491 289 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 HLA-DPB1P04440 258 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 SOD3P08294 240 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 H2BFMP0C1H6 154 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 PAX1P15863 534 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF182P17025 639 aaPredicted RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 GALP22466 123 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms