RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 OPA3Q9H6K4 179 aa26.28■■□□□ 1.8
LDB1-204ENST00000490751 OR5V1Q9UGF6 321 aa26.28■■□□□ 1.8
LDB1-204ENST00000490751 PPIAL4AQ9Y536 164 aa26.28■■□□□ 1.8
LDB1-204ENST00000490751 TBX1O43435 398 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 XRCC2O43543 280 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 FAM20BO75063 409 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 ZNF12P17014 697 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 ZNF154Q13106 437 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 MPPED2Q15777 294 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 ZNF404Q494X3 552 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 SHFQ7M4L6 423 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 KLBQ86Z14 1044 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP26.27■■□□□ 1.8
LDB1-204ENST00000490751 OR56B2PQ8NGI1 322 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 RNF133Q8WVZ7 376 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 ZMYND19Q96E35 227 aaPredicted RBP26.27■■□□□ 1.8
LDB1-204ENST00000490751 AMELYQ99218 206 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 MRPL15Q9P015 296 aaKnown RBP26.27■■□□□ 1.8
LDB1-204ENST00000490751 MIOXQ9UGB7 285 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 INSIG2Q9Y5U4 225 aa26.27■■□□□ 1.8
LDB1-204ENST00000490751 GMDSO60547 372 aa26.26■■□□□ 1.79
LDB1-204ENST00000490751 FSTL3O95633 263 aa26.26■■□□□ 1.79
LDB1-204ENST00000490751 ANXA2P07355 339 aaKnown RBP26.26■■□□□ 1.79
LDB1-204ENST00000490751 SSBP3Q9BWW4 388 aaPredicted RBP26.26■■□□□ 1.79
LDB1-204ENST00000490751 GSC2O15499 205 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 HMGN1P05114 100 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 CPT2P23786 658 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 CDK5Q00535 292 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 USP43Q70EL4 1123 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 SPSB4Q96A44 273 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 NEIL1Q96FI4 390 aaPredicted RBP26.25■■□□□ 1.79
LDB1-204ENST00000490751 SLC6A7Q99884 636 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 CADM1Q9BY67 442 aaKnown RBP26.25■■□□□ 1.79
LDB1-204ENST00000490751 DNAJC27Q9NZQ0 273 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 AUP1Q9Y679 476 aa26.25■■□□□ 1.79
LDB1-204ENST00000490751 HILS1P60008 231 aa26.24■■□□□ 1.79
LDB1-204ENST00000490751 GNB2P62879 340 aa26.24■■□□□ 1.79
LDB1-204ENST00000490751 KLHL12Q53G59 568 aa26.24■■□□□ 1.79
LDB1-204ENST00000490751 C19orf18Q8NEA5 215 aa26.24■■□□□ 1.79
LDB1-204ENST00000490751 FN3KRPQ9HA64 309 aa26.24■■□□□ 1.79
LDB1-204ENST00000490751 FBN3Q75N90 2809 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 SELENOFO60613 162 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 PTBP3O95758 552 aaKnown RBP26.23■■□□□ 1.79
LDB1-204ENST00000490751 APOC1P02654 83 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 OPRL1P41146 370 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 BNIP1Q12981 228 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 TIGD6Q17RP2 521 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 SLC16A9Q7RTY1 509 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 CPOQ8IVL8 374 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 BPIFB2Q8N4F0 458 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 ZFAND2BQ8WV99 257 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 C22orf15Q8WYQ4 148 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 PLEKHA8Q96JA3 519 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 MRI1Q9BV20 369 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 SUCNR1Q9BXA5 334 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 SP140LQ9H930 580 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 NTN4Q9HB63 628 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 DOCK11Q5JSL3 2073 aa26.23■■□□□ 1.79
LDB1-204ENST00000490751 PRODHO43272 600 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 DDOSTP39656 456 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 ZNF121P58317 390 aaPredicted RBP26.22■■□□□ 1.79
LDB1-204ENST00000490751 HOXA4Q00056 320 aaPredicted RBP26.22■■□□□ 1.79
LDB1-204ENST00000490751 ARMCX4Q5H9R4 360 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 TMEM236Q5W0B7 351 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 FAM57BQ71RH2 274 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 RHOUQ7L0Q8 258 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 NLRC3Q7RTR2 1065 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 PRSS45Q7RTY3 260 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 SPERTQ8NA61 448 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 OR8B3Q8NGG8 313 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 SGK3Q96BR1 496 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 REEP6Q96HR9 211 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 OR8B2Q96RD0 313 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 SLC25A19Q9HC21 320 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 KIF17Q9P2E2 1029 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 RNF7Q9UBF6 113 aa26.22■■□□□ 1.79
LDB1-204ENST00000490751 TIPRLO75663 272 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 LYNP07948 512 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 H2BFMP0C1H6 154 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 FAM3AP98173 230 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 DCDC5Q6ZRR9 648 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 PLPP7Q8NBV4 271 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 BBS1Q8NFJ9 593 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 OTOSQ8NHW6 89 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 NRBF2Q96F24 287 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 JMJD8Q96S16 334 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 BRD7Q9NPI1 651 aa26.21■■□□□ 1.79
LDB1-204ENST00000490751 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP26.2■■□□□ 1.78
LDB1-204ENST00000490751 ANKRD30BLA7E2S9 258 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 NAA10P41227 235 aaPredicted RBP26.2■■□□□ 1.78
LDB1-204ENST00000490751 PITPNBP48739 271 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 RPS7P62081 194 aaKnown RBP26.2■■□□□ 1.78
LDB1-204ENST00000490751 PAX2Q02962 417 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 LYPD2Q6UXB3 125 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 ZNF454Q8N9F8 522 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 OR52H1Q8NGJ2 320 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 THEM6Q8WUY1 208 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 DNAJC9Q8WXX5 260 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 TEX12Q9BXU0 123 aa26.2■■□□□ 1.78
LDB1-204ENST00000490751 GRPP07492 148 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms