RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ERVK-18Q9QC07 812 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 FAM32AQ9Y421 112 aaKnown RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 IGHV3OR15-7A0A075B7D8 119 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 OOEPA6NGQ2 149 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 TVP23AA6NH52 213 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 BHLHE40O14503 412 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 DVL1O14640 695 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 OR10H3O60404 316 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 GPR137BO60478 399 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 RENP00797 406 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 LIPFP07098 398 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 IRF2P14316 349 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 DLX1P56177 255 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 TPTEP56180 551 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL2A1-207ENST00000490609 MALLQ13021 153 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 PCK2Q16822 640 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 SLC36A3Q495N2 470 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 CD276Q5ZPR3 534 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 PGBD2Q6P3X8 592 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 LDLRAD3Q86YD5 345 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 CYB561A3Q8NBI2 242 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 LY6G5BQ8NDX9 201 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 DYRK2Q92630 601 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 LHX4Q969G2 390 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
COL2A1-207ENST00000490609 MRPL15Q9P015 296 aaKnown RBP12.81□□□□□ -0.36
COL2A1-207ENST00000490609 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 V9GYQ6 96 aa12.81□□□□□ -0.36
COL2A1-207ENST00000490609 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 IDH3BO43837 385 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 GADD45GO95257 159 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 SLC2A1P11166 492 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 MSX2P35548 267 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 PRB3Q04118 309 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 OR8B8Q15620 311 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 TAF9Q16594 264 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 C17orf107Q6ZR85 190 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 Q6ZSV7 163 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 MRPL21Q7Z2W9 205 aaKnown RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 PDZD9Q8IXQ8 264 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 ZSCAN4Q8NAM6 433 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 OR51L1Q8NGJ5 315 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 OR2AJ1Q8NGZ0 328 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 GATAD2BQ8WXI9 593 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 SPSB4Q96A44 273 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 PYURFQ96I23 114 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 SLC22A4Q9H015 551 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 CD300AQ9UGN4 299 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 RPUSD1Q9UJJ7 312 aaKnown RBP12.8□□□□□ -0.36
COL2A1-207ENST00000490609 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
COL2A1-207ENST00000490609 A0A0G2JK05 382 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 TSPAN15O95858 294 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 HLA-DQA2P01906 255 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 GRPP07492 148 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 RPL15P61313 204 aaKnown RBP12.79□□□□□ -0.36
COL2A1-207ENST00000490609 TSPAN31Q12999 210 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 PDCD1Q15116 288 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 KLHL12Q53G59 568 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 ZNF770Q6IQ21 691 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-207ENST00000490609 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 Q8N7P7 452 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
COL2A1-207ENST00000490609 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 BTBD10Q9BSF8 475 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 NMNAT2Q9BZQ4 307 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 MMP27Q9H306 513 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 ZNF319Q9P2F9 582 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 KCNG2Q9UJ96 466 aa12.79□□□□□ -0.36
COL2A1-207ENST00000490609 SAMD4AQ9UPU9 718 aaKnown RBP12.79□□□□□ -0.36
COL2A1-207ENST00000490609 TRAV38-1A0A0B4J264 116 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 MEGF11A6BM72 1044 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 NDUFA2O43678 99 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 CCDC22O60826 627 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 CRYBA1P05813 215 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 NOS3P29474 1203 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 PRKXP51817 358 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 HMGA2P52926 109 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 SPIBQ01892 262 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 METTL11BQ5VVY1 283 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 DRAM2Q6UX65 266 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 VMO1Q7Z5L0 202 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 ZNF511Q8NB15 262 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 SLC37A3Q8NCC5 494 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 TNFRSF14Q92956 283 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 SGK3Q96BR1 496 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 CCT8L2Q96SF2 557 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 CCL13Q99616 98 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 TRIM15Q9C019 465 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 C16orf95Q9H693 158 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 CNTD2Q9H8S5 307 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms