RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 MSANTD1Q6ZTZ1 278 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 NAA40Q86UY6 237 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 C11orf53Q8IXP5 236 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 MKXQ8IYA7 352 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 OR4X2Q8NGF9 303 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 OR5D13Q8NGL4 314 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 OR9Q1Q8NGQ5 310 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 LIPHQ8WWY8 451 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 SLC22A4Q9H015 551 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 ELL3Q9HB65 397 aaPredicted RBP10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 VSX1Q9NZR4 365 aaPredicted RBP10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 NOP16Q9Y3C1 178 aaKnown RBP10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 TLDC2A0PJX2 215 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 A6NIZ1 184 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 CTLA4P16410 223 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 CD247P20963 164 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 POLR2JP52435 117 aaKnown RBP10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 LGALS4P56470 323 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 RAP1BP61224 184 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 RAP1AP62834 184 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 C17orf53Q8N3J3 647 aaPredicted RBP10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 GOLGA6L1Q8N7Z2 621 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 LRRC75AQ8NAA5 344 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 RPS4Y2Q8TD47 263 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 UBLCP1Q8WVY7 318 aaPredicted RBP10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 LYZL4Q96KX0 146 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 COQ7Q99807 217 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 IKZF5Q9H5V7 419 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 SLAMF8Q9P0V8 285 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 SLC25A10Q9UBX3 287 aaPredicted RBP10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 ZNF391Q9UJN7 358 aa10.94□□□□□ -0.66
EXOSC3-207ENST00000490516 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 JTBO76095 146 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 ACSM4P0C7M7 580 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 NDUFB7P17568 137 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 COX7A1P24310 79 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 ECI1P42126 302 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 SLC1A6P48664 564 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 GMFBP60983 142 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 LSM6P62312 80 aaKnown RBP10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 MALLQ13021 153 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 DGUOKQ16854 277 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 STUMQ69YW2 141 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 MRPL21Q7Z2W9 205 aaKnown RBP10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 OR51D1Q8NGF3 324 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 TMEM239Q8WW34 195 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 RERGLQ9H628 205 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 TMEM38AQ9H6F2 299 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 ABCB10Q9NRK6 738 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 SNTG1Q9NSN8 517 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 RPS6KA6Q9UK32 745 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 PITPNC1Q9UKF7 332 aa10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 COA3Q9Y2R0 106 aaPredicted RBP10.93□□□□□ -0.66
EXOSC3-207ENST00000490516 M0QX08 132 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 POLR3GO15318 223 aaPredicted RBP10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 GLCEO94923 617 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 LCATP04180 440 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 IDO1P14902 403 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 JUNBP17275 347 aaPredicted RBP10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 RBM34P42696 430 aaKnown RBP10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 CSNK2BP67870 215 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 HIST1H3AP68431 136 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 ATPAF1Q5TC12 328 aaPredicted RBP10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 HIST2H3PS2Q5TEC6 136 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 CORO6Q6QEF8 472 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 C18orf65Q6ZTR6 163 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 HIST2H3AQ71DI3 136 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 WDR86Q86TI4 376 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 MICU2Q8IYU8 434 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 GAFA1Q96PS6 74 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 HDHD2Q9H0R4 259 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 RNPEPL1Q9HAU8 725 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 HAO1Q9UJM8 370 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 LHFPL6Q9Y693 200 aa10.92□□□□□ -0.66
EXOSC3-207ENST00000490516 TRAV27A0A087WT01 109 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 FAM90A8PA6NJQ4 464 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 F5H5K5 113 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 ANOS1P23352 680 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 MEP1BQ16820 701 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 MESTQ5EB52 335 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 WDR82Q6UXN9 313 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 IFT20Q8IY31 132 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 FAM185AQ8N0U4 392 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 LNX2Q8N448 690 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 OR52H1Q8NGJ2 320 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 OR51A7Q8NH64 312 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 C12orf43Q96C57 262 aaKnown RBP10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 HEXA-AS1Q9H8Q6 139 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 C14orf119Q9NWQ9 140 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 ZIM2Q9NZV7 527 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms