RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LHBP01229 141 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 GGT2P36268 569 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 RPS6KA3P51812 740 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 TPTEP56180 551 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 FXYD6P3P58550 94 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 ZNF92Q03936 586 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 KLRD1Q13241 179 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 AGBL2Q5U5Z8 902 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 CMTM4Q8IZR5 234 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 PNKDQ8N490 385 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 SLC26A10Q8NG04 563 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 OR2AE1Q8NHA4 323 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 CCL13Q99616 98 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 TOR3AQ9H497 397 aa11.44□□□□□ -0.58
VARS-227ENST00000489979 MRPL15Q9P015 296 aaKnown RBP11.44□□□□□ -0.58
VARS-227ENST00000489979 A0A0G2JND7 137 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 MEIOCA2RUB1 952 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 M0R135 149 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 NPPAP01160 153 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 ANOS1P23352 680 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 EFNB2P52799 333 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 SNAI3Q3KNW1 292 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 IFI44LQ53G44 452 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 COQ5Q5HYK3 327 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 DPY19L2P2Q6ZN68 376 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 TSEN54Q7Z6J9 526 aaKnown RBP11.43□□□□□ -0.58
VARS-227ENST00000489979 OR6V1Q8N148 313 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 KLHDC1Q8N7A1 406 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 Q8N7P7 452 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 SPERTQ8NA61 448 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 OR2AJ1Q8NGZ0 328 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 PPP1R35Q8TAP8 253 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 SLC7A13Q8TCU3 470 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 CFHR4Q92496 578 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
VARS-227ENST00000489979 NECAP2Q9NVZ3 263 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
VARS-227ENST00000489979 ADA2Q9NZK5 511 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 GMPR2Q9P2T1 348 aaKnown RBP11.43□□□□□ -0.58
VARS-227ENST00000489979 CYB5R1Q9UHQ9 305 aa11.43□□□□□ -0.58
VARS-227ENST00000489979 ZNF682O95780 498 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 SAA4P35542 130 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 PCK2Q16822 640 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 MICBQ29980 383 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 SLC36A3Q495N2 470 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 WDR38Q5JTN6 314 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 GLYATL3Q5SZD4 288 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 METTL21CQ5VZV1 264 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 LNX2Q8N448 690 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 FAM216BQ8N7L0 139 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 SGCDQ92629 289 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 ERMAPQ96PL5 475 aaPredicted RBP11.42□□□□□ -0.58
VARS-227ENST00000489979 TMEM120AQ9BXJ8 343 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 ANKRD19PQ9H560 264 aa11.42□□□□□ -0.58
VARS-227ENST00000489979 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.42□□□□□ -0.58
VARS-227ENST00000489979 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
VARS-227ENST00000489979 UNC119BA6NIH7 251 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 H3BUX3 64 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 NDUFB3O43676 98 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 HLA-DQA2P01906 255 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 MUC1P15941 1255 aaPredicted RBP11.41□□□□□ -0.58
VARS-227ENST00000489979 OMPP47874 163 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 IKZF1Q13422 519 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 LY6EQ16553 131 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 RFX4Q33E94 735 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 VAX1Q5SQQ9 334 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 C11orf88Q6PI97 169 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 FKBP9P1Q75LS8 142 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 CBLL1Q75N03 491 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 SLC36A1Q7Z2H8 476 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 CYP4Z1Q86W10 505 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 C11orf53Q8IXP5 236 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 OR56B2PQ8NGI1 322 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 OR4C13Q8NGP0 309 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 TNFRSF14Q92956 283 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 SEH1LQ96EE3 360 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 MAP6Q96JE9 813 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 NMNAT3Q96T66 252 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 RPRD1BQ9NQG5 326 aaKnown RBP11.41□□□□□ -0.58
VARS-227ENST00000489979 C14orf119Q9NWQ9 140 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 GID8Q9NWU2 228 aa11.41□□□□□ -0.58
VARS-227ENST00000489979 PRPF19Q9UMS4 504 aaKnown RBP11.41□□□□□ -0.58
VARS-227ENST00000489979 BBIP1A8MTZ0 92 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 BHLHE40O14503 412 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 ACOT8O14734 319 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 XPNPEP2O43895 674 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 RENP00797 406 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 H1F0P07305 194 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms