RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 ZC3HAV1LQ96H79 300 aaKnown RBP13.07□□□□□ -0.32
CTNS-206ENST00000488623 KCNS3Q9BQ31 491 aa13.07□□□□□ -0.32
CTNS-206ENST00000488623 POFUT1Q9H488 388 aa13.07□□□□□ -0.32
CTNS-206ENST00000488623 TBCCD1Q9NVR7 557 aa13.07□□□□□ -0.32
CTNS-206ENST00000488623 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 TRIM64BA6NI03 449 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 SYT7O43581 403 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 ICMTO60725 284 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 CLDN14O95500 239 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 UCHL1P09936 223 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 OCM2P0CE71 109 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 NAAAQ02083 359 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 ZNF92Q03936 586 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 Q6ZSR3 168 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 DOK3Q7L591 496 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 WFDC8Q8IUA0 241 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 OR14K1Q8NGZ2 314 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 LINC01560Q8TB33 94 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 NDNFQ8TB73 568 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 LRRC46Q96FV0 321 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 REEP6Q96HR9 211 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 FAM71F1Q96KD3 344 aaPredicted RBP13.06□□□□□ -0.32
CTNS-206ENST00000488623 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 DERL3Q96Q80 235 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 NOX4Q9NPH5 578 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 EIF3KQ9UBQ5 218 aaKnown RBP13.06□□□□□ -0.32
CTNS-206ENST00000488623 GSTK1Q9Y2Q3 226 aa13.06□□□□□ -0.32
CTNS-206ENST00000488623 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
CTNS-206ENST00000488623 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
CTNS-206ENST00000488623 SHISA3A0PJX4 238 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 ANKRD61A6NGH8 418 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 XRCC2O43543 280 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 EPXP11678 715 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 PCSK6P29122 969 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 UCP2P55851 309 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 CNPY1Q3B7I2 92 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 PAMR1Q6UXH9 720 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 RFPL4BQ6ZWI9 263 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 COMMD2Q86X83 199 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 OR13C3Q8NGS6 347 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 TSEN15Q8WW01 171 aaKnown RBP13.05□□□□□ -0.32
CTNS-206ENST00000488623 PHYHIPQ92561 330 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 KCTD7Q96MP8 289 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 MED18Q9BUE0 208 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 OR51B6Q9H340 312 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 ZNF275Q9NSD4 429 aaPredicted RBP13.05□□□□□ -0.32
CTNS-206ENST00000488623 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 DHDHQ9UQ10 334 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 V9GYS6 101 aa13.05□□□□□ -0.32
CTNS-206ENST00000488623 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SLC22A1O15245 554 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SMPD2O60906 423 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 CLEC2LP0C7M8 214 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 CD40P25942 277 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SERPINB10P48595 397 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 FAM3AP98173 230 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SORDQ00796 357 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 TNK1Q13470 666 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 ASPHD2Q6ICH7 369 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 OR5L1Q8NGL2 311 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 SSC4DQ8WTU2 575 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 AKAP1Q92667 903 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTNS-206ENST00000488623 FGGYQ96C11 551 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
CTNS-206ENST00000488623 RGCCQ9H4X1 137 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 NPDC1Q9NQX5 325 aaPredicted RBP13.04□□□□□ -0.32
CTNS-206ENST00000488623 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
CTNS-206ENST00000488623 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 hCG_38984A0A1B0GV85 526 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 A6NIN4 97 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 DHRS3O75911 302 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 CDRT1O95170 752 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 RAF1P04049 648 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 RNF224P0DH78 156 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 MAPK3P27361 379 aaPredicted RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 SDC2P34741 201 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 GSK3AP49840 483 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 PRSS12P56730 875 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 PPP1CBP62140 327 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 MALLQ13021 153 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 GK2Q14410 553 aaPredicted RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 HSD17B12Q53GQ0 312 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 CCDC54Q8NEL0 328 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
CTNS-206ENST00000488623 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
CTNS-206ENST00000488623 TRAV8-7A0A075B6U6 113 aa13.02□□□□□ -0.33
CTNS-206ENST00000488623 TRAV1-2A0A0B4J238 106 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms