RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 COLCA2A8K830 154 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 NDUFC2-KCTD14E9PQ53 114 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 H0YJW9 148 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 H7C1H1 209 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 TNFRSF11BO00300 401 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF207O43670 478 aaKnown RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 NEMFO60524 1076 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PTHP01270 115 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 S100A9P06702 114 aaKnown RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 STAG3L3P0CL85 134 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 RALBP11234 206 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLC1A2P43004 574 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PPICP45877 212 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CYP24A1Q07973 514 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CDC20Q12834 499 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PNOCQ13519 176 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF829Q3KNS6 432 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 DNLZQ5SXM8 178 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PLCXD3Q63HM9 321 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 GUSBP11Q6P575 273 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 TMEM220Q6QAJ8 160 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 WDR82Q6UXN9 313 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 TMCO2Q7Z6W1 182 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CBLN2Q8IUK8 224 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 MYOCDQ8IZQ8 938 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR6N1Q8NGY5 312 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF721Q8TF20 911 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 RAB1CQ92928 201 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PEX13Q92968 403 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 RPEQ96AT9 228 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 SGTBQ96EQ0 304 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 RBBP8Q99708 897 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CHCHD7Q9BUK0 85 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 FGF23Q9GZV9 251 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 STMN4Q9H169 189 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CFAP45Q9UL16 551 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 CBY1Q9Y3M2 126 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 COL22A1Q8NFW1 1626 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 FHOD3Q2V2M9 1422 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 PLEKHG2Q9H7P9 1386 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 IGKV1D-17A0A075B6S4 117 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR5H1A6NKK0 313 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 KRBOX1C9JBD0 128 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ANKRD65E5RJM6 399 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 NME4O00746 187 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 BCKDKO14874 412 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 SPOPO43791 374 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 PLIN3O60664 434 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 SCO1O75880 301 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 CD160O95971 181 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 IGKV1-17P01599 117 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 HLA-DQB1P01920 261 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 CTRB1P17538 263 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 USF1P22415 310 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 PSMB5P28074 263 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ANP32AP39687 249 aaKnown RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 GPR1P46091 355 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ETV1P50549 477 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 FABP6P51161 128 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 CCNG1P51959 295 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 GFERP55789 205 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 YWHAEP62258 255 aaKnown RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 DMTNQ08495 405 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 TMEM205Q6UW68 189 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 UNQ9165/PRO28630Q6UXU0 137 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 C8orf31Q8N9H6 132 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 C11orf72Q8NBR9 251 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR52P1PQ8NH57 321 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ITFG1Q8TB96 612 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 RMI2Q96E14 147 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 RNF145Q96MT1 663 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 CTRCQ99895 268 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 KCNS3Q9BQ31 491 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 EMC6Q9BV81 110 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 FRMD8P1Q9BZ68 369 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ACP6Q9NPH0 428 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 RRAGDQ9NQL2 400 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 ADA2Q9NZK5 511 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 RCL1Q9Y2P8 373 aaKnown RBP2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 S4R3C0 116 aa2.15□□□□□ -2.07
HMGB1P36-201ENST00000487709 DENND4AQ7Z401 1863 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 PIK3R4Q99570 1358 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 SMIM26A0A096LP01 95 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 TRAV25A0A0B4J276 109 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CENPBD1B2RD01 187 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 M0QX08 132 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 SLC16A7O60669 478 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 MPDU1O75352 247 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 GLSO94925 669 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CDRT1O95170 752 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 FARS2O95363 451 aaKnown RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 LCA5LO95447 670 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CYB5R3P00387 301 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 MT-ND4P03905 459 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ZNF14P17017 642 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 APLNRP35414 380 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CLDN18P56856 261 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 MOBPQ13875 183 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ITIH4Q14624 930 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 HSP90AA4PQ58FG1 418 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms