RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 FGGYQ96C11 551 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
CUX1-209ENST00000487284 ZFP3Q96NJ6 502 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 STEAP1Q9UHE8 339 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
CUX1-209ENST00000487284 A0A0G2JMP0 313 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 A0A0X1KG70 313 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 LOC390937A0A1W2PQ73 354 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 C5orf63A6NC05 138 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 B8ZZF3 427 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 C1QL1O75973 258 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 ITGA5P08648 1049 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 DDOSTP39656 456 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 NR4A2P43354 598 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 HTR5AP47898 357 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 SLC6A9P48067 706 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 CASP6P55212 293 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 TPTEP56180 551 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 CLDN12P56749 244 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 DEFA1P59665 94 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 DEFA3P59666 94 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 FAPQ12884 760 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 SLC36A2Q495M3 483 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 FBXW9Q5XUX1 488 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 NKAIN3Q8N8D7 197 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 OR4M2Q8NGB6 313 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 AKR7LQ8NHP1 331 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 COX4I2Q96KJ9 171 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 DMRTA2Q96SC8 542 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 VKORC1Q9BQB6 163 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 SP140LQ9H930 580 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 ZNF462Q96JM2 2506 aa12.36□□□□□ -0.43
CUX1-209ENST00000487284 A0A1W2PQ09 198 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 PTTG1O95997 202 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 CRHP06850 196 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 OCMP0CE72 109 aaPredicted RBP12.35□□□□□ -0.43
CUX1-209ENST00000487284 PITPNBP48739 271 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 HGFACQ04756 655 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
CUX1-209ENST00000487284 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 SFRP5Q5T4F7 317 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 GLT8D1Q68CQ7 371 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 PYHIN1Q6K0P9 492 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 LYPD6Q86Y78 171 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 CMTM4Q8IZR5 234 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 UBE2J2Q8N2K1 259 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 POC5Q8NA72 575 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 CCDC54Q8NEL0 328 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 LYZL4Q96KX0 146 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 MEMO1Q9Y316 297 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 A0A0G2JNJ9 132 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 UBL3O95164 117 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 ZNF20P17024 532 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 MPGP29372 298 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 SCN1BQ07699 218 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 RAB11BQ15907 218 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 PABPC1L2AQ5JQF8 200 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 Q8N402 240 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 OR1M1Q8NGA1 313 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 OR6M1Q8NGM8 313 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 RAB40AQ8WXH6 277 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
CUX1-209ENST00000487284 RABL2AQ9UBK7 228 aaPredicted RBP12.35□□□□□ -0.43
CUX1-209ENST00000487284 Q9UFV3 132 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 RABL2BQ9UNT1 228 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 V9GYS6 101 aa12.35□□□□□ -0.43
CUX1-209ENST00000487284 DHRS3O75911 302 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 IL18BPO95998 194 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 CGAP01215 116 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 COX5BP10606 129 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 BDKRB2P30411 391 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 GNALP38405 381 aa12.34□□□□□ -0.43
CUX1-209ENST00000487284 UQCRFS1P47985 274 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms