RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CNTD2Q9H8S5 307 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ANKRD30BLA7E2S9 258 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 FTCDNL1E5RQL4 147 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 NPIPB9F8W1W9 429 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 CCL2P13500 99 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 SELENOPP49908 381 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF585AQ6P3V2 769 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF574Q6ZN55 896 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-216ENST00000486741 BEND4Q6ZU67 534 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 C20orf196Q8IYI0 205 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 MARCH1Q8TCQ1 289 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 FER1L6-AS2Q96M78 137 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 C12orf10Q9HB07 376 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 CACNA1DQ01668 2161 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 IGLV3-19P01714 112 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 EPHA1P21709 976 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 KIR3DL2P43630 455 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 SHBQ15464 509 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 PHLDA2Q53GA4 152 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 LINC01590Q5TEZ4 76 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ASF1BQ9NVP2 202 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 C5orf49A4QMS7 147 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 LMX1BO60663 402 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 IKZF1Q13422 519 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF774Q6NX45 483 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 GTPBP8Q8N3Z3 284 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 ASB5Q8WWX0 329 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 APH1AQ96BI3 265 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 C5orf42Q9H799 3197 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 FADS1O60427 444 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF780AO75290 641 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 TPPPO94811 219 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 CAV2P51636 162 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 EFNA3P52797 238 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 GK2Q14410 553 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 PPA1Q15181 289 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 NHLRC1Q6VVB1 395 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 TRILQ7L0X0 811 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 TEX19Q8NA77 164 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 DUSP18Q8NEJ0 188 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 SLC39A7Q92504 469 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF230Q9UIE0 474 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-216ENST00000486741 TCFL5Q9UL49 500 aa11.77□□□□□ -0.52
HMGN1-216ENST00000486741 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 TRIM64BA6NI03 449 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 TNFSF12O43508 249 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 FBXO24O75426 580 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ANKRD34CP0C6C1 535 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF616Q08AN1 781 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ARL6IP1Q15041 203 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 PLEKHN1Q494U1 663 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 LIX1LQ8IVB5 337 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 NAXDQ8IW45 347 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 CHAC2Q8WUX2 184 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ST8SIA2Q92186 375 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF385AQ96PM9 386 aaKnown RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 UBL7Q96S82 380 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 TSNAXQ99598 290 aaKnown RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 SHPKQ9UHJ6 478 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 LAMA3Q16787 3333 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF814B7Z6K7 855 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 KLRC4-KLRK1H3BQV0 150 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 CHRM2P08172 466 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 NAT2P11245 290 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 DUSP1P28562 367 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 EIF5AP63241 154 aaKnown RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 C3AR1Q16581 482 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.53
HMGN1-216ENST00000486741 ANKRD16Q6P6B7 361 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 VHLLQ6RSH7 139 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 NLRC3Q7RTR2 1065 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 PRSS35Q8N3Z0 413 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 SLC26A10Q8NG04 563 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 FANCFQ9NPI8 374 aa11.77□□□□□ -0.53
HMGN1-216ENST00000486741 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR4E1P0C645 316 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 AVPR2P30518 371 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 PPIAP62937 165 aaKnown RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 GSG1Q2KHT4 349 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 ISXQ2M1V0 245 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 CREB3L2Q70SY1 520 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR2M3Q8NG83 312 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR10D3Q8NH80 312 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 FNDC9Q8TBE3 224 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 SECTM1Q8WVN6 248 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 S100PBPQ96BU1 408 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 RAB33BQ9H082 229 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF275Q9NSD4 429 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 HEATR5AQ86XA9 2040 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 A0A1W2PR80 420 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 MGMTP16455 207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms