RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 MEGF10Q96KG7 1140 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 OR8B4Q96RC9 309 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 MBOAT4Q96T53 435 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 SLC29A1Q99808 456 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 SOX7Q9BT81 388 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 RGCCQ9H4X1 137 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 TMEM106BQ9NUM4 274 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 MRPL15Q9P015 296 aaKnown RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 LOC100289279A0A1B0GTE1 492 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 PRR32B1ATL7 298 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 E9PQ18 207 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF254O75437 659 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 SBK2P0C263 348 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 HOXB4P17483 251 aaPredicted RBP15.38■□□□□ 0.05
COL1A1-207ENST00000486572 CA6P23280 308 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 GFOD2Q3B7J2 385 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF679Q8IYX0 411 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 RFLNBQ8N5W9 214 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 ADAT1Q9BUB4 502 aaKnown RBP15.38■□□□□ 0.05
COL1A1-207ENST00000486572 TTTY10Q9BZA0 68 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 GCM1Q9NP62 436 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 CLN6Q9NWW5 311 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF319Q9P2F9 582 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 IKZF2Q9UKS7 526 aa15.38■□□□□ 0.05
COL1A1-207ENST00000486572 hCG_38984A0A1B0GV85 526 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF670-ZNF695F2Z2N8 137 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 IFNL4K9M1U5 179 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 PSMD9O00233 223 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 DCTDP32321 178 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 DDOSTP39656 456 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 MMP16P51512 607 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 CXCR4P61073 352 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 FAM3AP98173 230 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 TMED1Q13445 227 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 OR8G1Q15617 311 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 FAM166AQ6J272 317 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF322Q6U7Q0 402 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-207ENST00000486572 CELF2-AS1Q8N7Q2 184 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 C1orf159Q96HA4 380 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 DCAF16Q9NXF7 216 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 GMPPBQ9Y5P6 360 aa15.37■□□□□ 0.05
COL1A1-207ENST00000486572 ABCA2Q9BZC7 2435 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 ISPDA4D126 451 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 ANKRD65E5RJM6 399 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 GMDSO60547 372 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 TGFAP01135 160 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 CD200P41217 278 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 RIDAP52758 137 aaKnown RBP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 CDH15P55291 814 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 SNRPGP62308 76 aaKnown RBP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 HNRNPA0Q13151 305 aaKnown RBP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 RCN1Q15293 331 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF829Q3KNS6 432 aaPredicted RBP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 SLC25A30Q5SVS4 291 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 LINC01356Q8N9X3 169 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 OR8B12Q8NGG6 310 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 UBE2FQ969M7 185 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 POM121Q96HA1 1249 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 FAM206AQ9NX38 181 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF391Q9UJN7 358 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 KCNS2Q9ULS6 477 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 NPTNQ9Y639 398 aa15.36■□□□□ 0.05
COL1A1-207ENST00000486572 SONP18583 2426 aaKnown RBP15.36■□□□□ 0.05
COL1A1-207ENST00000486572 NAV3Q8IVL0 2385 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 IGHV3-64DA0A0J9YX35 117 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 TMEM269A0A1B0GVZ9 245 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 ACOD1A6NK06 481 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 ANKRD30BLA7E2S9 258 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 ANPEPP15144 967 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 ATP6V1E1P36543 226 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 GATA4P43694 442 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 GSK3AP49840 483 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 LMO4P61968 165 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 EGR3Q06889 387 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 MAB21L1Q13394 359 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 OR8B8Q15620 311 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 MEDAGQ5VYS4 303 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 MOGAT3Q86VF5 341 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 KLBQ86Z14 1044 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 RAB39BQ96DA2 213 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 SIGLEC11Q96RL6 698 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 GAL3ST1Q99999 423 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF665Q9H7R5 613 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 TMEM160Q9NX00 188 aa15.35■□□□□ 0.05
COL1A1-207ENST00000486572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL1A1-207ENST00000486572 DYSFO75923 2080 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 ZFHX3Q15911 3703 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.34■□□□□ 0.05
COL1A1-207ENST00000486572 B4DSR2 109 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 TMEM178BH3BS89 294 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 LMX1BO60663 402 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 ENTPD6O75354 484 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 CRLF1O75462 422 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 APOL3O95236 402 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 IGHV2-70P01814 119 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 OR2T7P0C7T2 308 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 RBMXP38159 391 aaKnown RBP15.34■□□□□ 0.05
COL1A1-207ENST00000486572 BTG1P62324 171 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 SNCBQ16143 134 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms