RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 OTOSQ8NHW6 89 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM234Q8WY98 164 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 RGP1Q92546 391 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 RBPMSQ93062 196 aaKnown RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM106AQ96A25 262 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 PTX4Q96A99 478 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 SPACA9Q96E40 222 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 MAP6Q96JE9 813 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 OR8B4Q96RC9 309 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 TBL1XR1Q9BZK7 514 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZDHHC11Q9H8X9 412 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 MYOZ1Q9NP98 299 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 DHDHQ9UQ10 334 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 CELSR1Q9NYQ6 3014 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 PLSCR5A0PG75 271 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 OR2M5A3KFT3 312 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TO15178 435 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 GMDSO60547 372 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 AHSA1O95433 338 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 IGHMP01871 453 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 HLA-DQA2P01906 255 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 HPXP02790 462 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 RLN1P04808 185 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 ALDOBP05062 364 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 LPLP06858 475 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 UBBP0CG47 229 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 UBCP0CG48 685 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 GTF2F2P13984 249 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TACR3P29371 465 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SOX2P48431 317 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SLC37A1P57057 533 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 RPS27AP62979 156 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 UBA52P62987 128 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 GK2Q14410 553 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SLC17A1Q14916 467 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 POU4F3Q15319 338 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TOMM34Q15785 309 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 MESTQ5EB52 335 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 CLVS2Q5SYC1 327 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 PRAMEF20Q5VT98 475 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM211Q6ICI0 200 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 LIN54Q6MZP7 749 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 CCDC36Q8IYA8 594 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM251Q8N6I4 163 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM229BQ8NBD8 167 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 CCDC168Q8NDH2 2452 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 BEST4Q8NFU0 473 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 OR6M1Q8NGM8 313 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 OR5M9Q8NGP3 310 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 OR4C3Q8NH37 302 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 STK35Q8TDR2 534 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 RNF128Q8TEB7 428 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 TSPAN32Q96QS1 320 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 GFI1Q99684 422 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SEC22CQ9BRL7 303 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 WWTR1Q9GZV5 400 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 ADAM19Q9H013 955 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 LDAHQ9H6V9 325 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 EXO5Q9H790 373 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 RDH8Q9NYR8 311 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 FRRS1LQ9P0K9 344 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 SPEF1Q9Y4P9 236 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 LIPGQ9Y5X9 500 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 PDZD2O15018 2839 aa7.98□□□□□ -1.13
COL12A1-208ENST00000486533 INTS1Q8N201 2190 aaKnown RBP7.98□□□□□ -1.13
COL12A1-208ENST00000486533 A0A0D9SG52 128 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RPS10-NUDT3A0A1W2PQS6 291 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 METTL21EPA6NDL7 271 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 FAM90A27PA6NNH2 459 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 A8MVM7 634 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DISC1C4P0D8 188 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ADAM11O75078 769 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CTAG2O75638 210 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 BGLAPP02818 100 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MAS1P04201 325 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CELA3AP09093 270 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF823P16415 610 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RAB6AP20340 208 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ACHEP22303 614 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 GRPRP30550 384 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CALCRP30988 508 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RAD52P43351 418 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SELENOPP49908 381 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DAP3P51398 398 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RPL27P61353 136 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ROM1Q03395 351 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 GLO1Q04760 184 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PMPCAQ10713 525 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 FOXO1Q12778 655 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SLC10A1Q14973 349 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 EBPQ15125 230 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 GXYLT1Q4G148 440 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM244Q5VVB8 128 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF585AQ6P3V2 769 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DEGS2Q6QHC5 323 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RFPL4BQ6ZWI9 263 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms