RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 KLHL12Q53G59 568 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 SPANXN2Q5MJ10 180 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 PRSS54Q6PEW0 395 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 TBPL2Q6SJ96 375 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 MBOAT2Q6ZWT7 520 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 CBR4Q8N4T8 237 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 MCUR1Q96AQ8 359 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 ECHDC3Q96DC8 303 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 C18orf15Q96N68 181 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 MYCBPQ99417 103 aaPredicted RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 MARVELD1Q9BSK0 173 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 GEMIN7Q9H840 131 aaKnown RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 CSNK1G1Q9HCP0 422 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 RETNQ9HD89 108 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 MYOZ1Q9NP98 299 aaPredicted RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 LYARQ9NX58 379 aaKnown RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 PDP1Q9P0J1 537 aaPredicted RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 NSD2O96028 1365 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 INSRP06213 1382 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 FHOD3Q2V2M9 1422 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 IGKV1-27A0A075B6S5 117 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 CDH16O75309 829 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 CD160O95971 181 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 HRES1P13985 223 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 STOMP27105 288 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 BMI1P35226 326 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 MPV17P39210 176 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 UBE2E1P51965 193 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 TAS2R46P59540 309 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 ELF3P78545 371 aaPredicted RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 SLC25A35Q3KQZ1 300 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 DEGS2Q6QHC5 323 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 BZW1Q7L1Q6 419 aaKnown RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 CENPQQ7L2Z9 268 aaPredicted RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 SGPP2Q8IWX5 399 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 OR9G4Q8NGQ1 327 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 OR51E1Q8TCB6 317 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 TSEN15Q8WW01 171 aaKnown RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 GHSRQ92847 366 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 XPO6Q96QU8 1125 aaKnown RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 PCDH11XQ9BZA7 1347 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 ZYG11BQ9C0D3 744 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 ACTR3CQ9C0K3 210 aaPredicted RBP2.04□□□□□ -2.08
LTN1-206ENST00000486427 RAB20Q9NX57 234 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 COMMD3-BMI1R4GMX3 469 aa2.04□□□□□ -2.08
LTN1-206ENST00000486427 A0A075B6Q4 140 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 OR6C70A6NIJ9 312 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 NMT2O60551 498 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 PFN1P07737 140 aaKnown RBP2.03□□□□□ -2.08
LTN1-206ENST00000486427 CD28P10747 220 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 CTRB1P17538 263 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 EIF2S2P20042 333 aaKnown RBP2.03□□□□□ -2.08
LTN1-206ENST00000486427 IL32P24001 234 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 NDUFA8P51970 172 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 MERTKQ12866 999 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 IHHQ14623 411 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 RCN1Q15293 331 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 SPESP1Q6UW49 350 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 LUZP2Q86TE4 346 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 GABRG1Q8N1C3 465 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 PQLC3Q8N755 202 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 OR6Q1Q8NGQ2 317 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 FAM81AQ8TBF8 368 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 NRBF2Q96F24 287 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 GPR82Q96P67 336 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 SEC22CQ9BRL7 303 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 SLIRPQ9GZT3 109 aaKnown RBP2.03□□□□□ -2.08
LTN1-206ENST00000486427 TMEM38AQ9H6F2 299 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 PTTG3PQ9NZH4 202 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
LTN1-206ENST00000486427 TICRRQ7Z2Z1 1910 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 KCNE1BA0A087WTH5 132 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 KBTBD11-OT1A0A1B0GTJ5 212 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 H7C0C1 242 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 SLC9A3R1O14745 358 aaPredicted RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 CHMP2AO43633 222 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 LSM8O95777 96 aaKnown RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 ERCC1P07992 297 aaPredicted RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 CSNK2A2P19784 350 aaPredicted RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 CD70P32970 193 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 UQCRFS1P47985 274 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 ATP5OP48047 213 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 RAB9AP51151 201 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 ZNF121P58317 390 aaPredicted RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 CUL2Q13617 745 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 DEFB134Q4QY38 66 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 TPTE2P1Q5T6R2 138 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 SMARCD3Q6STE5 483 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 SSX9Q7RTT3 188 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 TTC29Q8NA56 475 aaPredicted RBP2.02□□□□□ -2.09
LTN1-206ENST00000486427 PRRC1Q96M27 445 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 C1orf50Q9BV19 199 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 NUDT9Q9BW91 350 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 AGPAT4Q9NRZ5 378 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 CLN6Q9NWW5 311 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 GCNT4Q9P109 453 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 CLN8Q9UBY8 286 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
LTN1-206ENST00000486427 ADGRA3Q8IWK6 1321 aa2.01□□□□□ -2.09
LTN1-206ENST00000486427 IGHV3OR16-9A0A0B4J2B5 98 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms