RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 STX18Q9P2W9 335 aaKnown RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 ZNF256Q9Y2P7 627 aaPredicted RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 NDUFAF1Q9Y375 327 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 ZSCAN12O43309 604 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 NDUFB3O43676 98 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 HIST1H2ABP04908 130 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 ALDOCP09972 364 aaKnown RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 UMPSP11172 480 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 NR2C1P13056 603 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 MUC1P15941 1255 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 CA6P23280 308 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 MYF6P23409 242 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 ALDH3A1P30838 453 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 CCT5P48643 541 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 GNG11P61952 73 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 RPL23AP62750 156 aaKnown RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 GK2Q14410 553 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 OR8G1Q15617 311 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 GTDC1Q4AE62 458 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 CCDC92Q53HC0 331 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 LDLRAD2Q5SZI1 272 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 ZNF613Q6PF04 617 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 HIST3H2AQ7L7L0 130 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 SLC36A1Q7Z2H8 476 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 TSPYL5Q86VY4 417 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 OR5D13Q8NGL4 314 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 RPS4Y2Q8TD47 263 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 H1FXQ92522 213 aaKnown RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 HIST1H2ACQ93077 130 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 SEH1LQ96EE3 360 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 DUS3LQ96G46 650 aaKnown RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 Q96M66 194 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 ZIM3Q96PE6 472 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 OR52E6Q96RD3 313 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 RMND5AQ9H871 391 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 MEPEQ9NQ76 525 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 THUMPD1Q9NXG2 353 aaKnown RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 PSMC3IPQ9P2W1 217 aaPredicted RBP6.54□□□□□ -1.36
XRN1-212ENST00000486211 ATPIF1Q9UII2 106 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 PITPNC1Q9UKF7 332 aa6.54□□□□□ -1.36
XRN1-212ENST00000486211 TMEM247A6NEH6 219 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 RFXANKO14593 260 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 SNRNP70P08621 437 aaKnown RBP6.53□□□□□ -1.36
XRN1-212ENST00000486211 ZCCHC18P0CG32 403 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 CEBPDP49716 269 aaPredicted RBP6.53□□□□□ -1.36
XRN1-212ENST00000486211 GSK3BP49841 420 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 DYNLT3P51808 116 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 NME5P56597 212 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 UFM1P61960 85 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 LRRC74AQ0VAA2 488 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 BLMHQ13867 455 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 MICBQ29980 383 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
XRN1-212ENST00000486211 LRRC10Q5BKY1 277 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 C9orf66Q5T8R8 295 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 ATPAF1Q5TC12 328 aaPredicted RBP6.53□□□□□ -1.36
XRN1-212ENST00000486211 OTPQ5XKR4 325 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 STUMQ69YW2 141 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 OR2W3Q7Z3T1 314 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 EGFL6Q8IUX8 553 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 C11orf53Q8IXP5 236 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 MKXQ8IYA7 352 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 C11orf42Q8N5U0 333 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 PPP1R36Q96LQ0 422 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 DUX3Q96PT4 197 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 RBP7Q96R05 134 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 FMO2Q99518 471 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 ADAT1Q9BUB4 502 aaKnown RBP6.53□□□□□ -1.36
XRN1-212ENST00000486211 HCAR1Q9BXC0 346 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 TSPYL1Q9H0U9 437 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 TXNIPQ9H3M7 391 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 ANGPT4Q9Y264 503 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
XRN1-212ENST00000486211 A0A1W2PQ09 198 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 hCG_1807616A0A1W2PRN6 198 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 A6NLC8 198 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 H0YAE9 185 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 M0R3H8 397 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 TFF1P04155 84 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 SLC6A1P30531 599 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 GUCA1AP43080 201 aaPredicted RBP6.52□□□□□ -1.37
XRN1-212ENST00000486211 ECH1Q13011 328 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 AQP6Q13520 282 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 RGNQ15493 299 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 DGUOKQ16854 277 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 TTC33Q6PID6 262 aaPredicted RBP6.52□□□□□ -1.37
XRN1-212ENST00000486211 SATL1Q86VE3 508 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 FNDC8Q8TC99 324 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 LRRC29Q8WV35 223 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 C12orf43Q96C57 262 aaKnown RBP6.52□□□□□ -1.37
XRN1-212ENST00000486211 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 MCHR1Q99705 422 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 SLC22A4Q9H015 551 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 ADA2Q9NZK5 511 aa6.52□□□□□ -1.37
XRN1-212ENST00000486211 VSX1Q9NZR4 365 aaPredicted RBP6.52□□□□□ -1.37
XRN1-212ENST00000486211 KMT2AQ03164 3969 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 FAM90A22PA8MWA6 464 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms