RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RAB25P57735 213 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 NAA20P61599 178 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ELF3P78545 371 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-210ENST00000485247 CAV1Q03135 178 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 FMODQ06828 376 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 NPTX1Q15818 432 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 AANATQ16613 207 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 C6orf136Q5SQH8 315 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 INTS11Q5TA45 600 aaKnown RBP4.24□□□□□ -1.73
PTPN4-210ENST00000485247 FAM27BQ5VT28 67 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 NCR3LG1Q68D85 454 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ULK3Q6PHR2 472 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 C10orf99Q6UWK7 81 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ZDHHC24Q6UX98 284 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ZYG11AQ6WRX3 759 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 RNF165Q6ZSG1 346 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 FAM90A1Q86YD7 464 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 CLDN22Q8N7P3 220 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 OR51D1Q8NGF3 324 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 OR4X2Q8NGF9 303 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 OR6S1Q8NH40 331 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 AGR3Q8TD06 166 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ADAMTS16Q8TE57 1224 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ZNF583Q96ND8 569 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 CCDC115Q96NT0 180 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ECSITQ9BQ95 431 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 MRPL13Q9BYD1 178 aaKnown RBP4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ARMC7Q9H6L4 198 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 TMEM100Q9NV29 134 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 ETAA1Q9NY74 926 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 TAS2R5Q9NYW4 299 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 NINJ2Q9NZG7 142 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 PTTG3PQ9NZH4 202 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 RNF7Q9UBF6 113 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 UGT2A1Q9Y4X1 527 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
PTPN4-210ENST00000485247 DNAH7Q8WXX0 4024 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 IGKV1D-43A0A0B4J1Z2 117 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 LINC00473A8K010 186 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 MCIDASD6RGH6 385 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SLC16A6O15403 523 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 PROP1O75360 226 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 TRMUO75648 421 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SLC22A3O75751 556 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 LY6G6CO95867 125 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 MT-ATP6P00846 226 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 BCHEP06276 602 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 ACADSP16219 412 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 MYF6P23409 242 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 PAFAH1B1P43034 410 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 VEGFCP49767 419 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 CRISP3P54108 245 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 RAD23AP54725 363 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 CLDN8P56748 225 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 DNAJB13P59910 316 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 PCBD1P61457 104 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 ECH1Q13011 328 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 UGT3A2Q3SY77 523 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 C10orf128Q5T292 105 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 ANXA8L1Q5VT79 327 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 HHATQ5VTY9 493 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 HCP5Q6MZN7 132 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SATL1Q86VE3 508 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 LCA5Q86VQ0 697 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SLC30A8Q8IWU4 369 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 LSMEM1Q8N8F7 131 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 FAM156AQ8NDB6 213 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 NOXO1Q8NFA2 376 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 OR8J2Q8NGG1 315 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 DNAJA4Q8WW22 397 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 H1FXQ92522 213 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SLC7A6Q92536 515 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 LYZL4Q96KX0 146 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 CCL13Q99616 98 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 NUF2Q9BZD4 464 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 METTL8Q9H825 291 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 RMND5AQ9H871 391 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 WDR76Q9H967 626 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 CACYBPQ9HB71 228 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 TRIM36Q9NQ86 728 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 P2RX2Q9UBL9 471 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 EMCNQ9ULC0 261 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 TCF19Q9Y242 345 aa4.23□□□□□ -1.73
PTPN4-210ENST00000485247 UTP11Q9Y3A2 253 aaKnown RBP4.23□□□□□ -1.73
PTPN4-210ENST00000485247 A6NDX4 124 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 NKX6-3A6NJ46 265 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 CGB1A6NKQ9 187 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 IQCF6A8MYZ5 107 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 H0YAE9 185 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 BLOC1S5-TXNDC5H3BN57 136 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 H3BUI4 141 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 NDUFB3O43676 98 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 DOK2O60496 412 aa4.22□□□□□ -1.73
PTPN4-210ENST00000485247 CH25HO95992 272 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms