RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 CCNJQ5T5M9 372 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 FNDC7Q5VTL7 733 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 C5orf46Q6UWT4 87 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SHISA6Q6ZSJ9 500 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 Q6ZSR3 168 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SSX8Q7RTT4 187 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CLNKQ7Z7G1 428 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ZAR1Q86SH2 424 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 LACC1Q8IV20 430 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 C8orf31Q8N9H6 132 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 LINC01356Q8N9X3 169 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 INO80EQ8NBZ0 244 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 OR2V1Q8NHB1 315 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ARMC1Q9NVT9 282 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CLN8Q9UBY8 286 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 PRODH2Q9UF12 536 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TCF19Q9Y242 345 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 MRPS28Q9Y2Q9 187 aaKnown RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 V9GYY9 64 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 A0A1W2PQD3 144 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 G3V2L1 256 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TP53I11O14683 189 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ENSAO43768 121 aaKnown RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TPST2O60704 377 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SOX3P41225 446 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 LIMS1P48059 325 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CLDN15P56746 228 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CLDN18P56856 261 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 RAB8AP61006 207 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 RPS13P62277 151 aaKnown RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 RBX1P62877 108 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 KIAA0040Q15053 153 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 DMRTC1Q5HYR2 192 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 OTUD3Q5T2D3 398 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SPINK14Q6IE38 97 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 FAM71E1Q6IPT2 247 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SLC25A47Q6Q0C1 308 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 LRRN1Q6UXK5 716 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SLC16A14Q7RTX9 510 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 WDR53Q7Z5U6 358 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 NRMQ8IXM6 262 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 KIF2BQ8N4N8 673 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 THAP8Q8NA92 274 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 OR4A4PQ8NGN8 299 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 AGAP11Q8TF27 550 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 GCDHQ92947 438 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 HS3ST6Q96QI5 342 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 FAIM2Q9BWQ8 316 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF430Q9H8G1 570 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 RETNQ9HD89 108 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 MAT2BQ9NZL9 334 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 IKZF2Q9UKS7 526 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 DIMT1Q9UNQ2 313 aaKnown RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 IGHV3-20A0A0C4DH32 117 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 FAM157AC9JC47 383 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 CCL21O00585 134 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 AZIN1O14977 448 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 CHST1O43916 411 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 CA1P00915 261 aaPredicted RBP4.59□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF844Q08AG5 666 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 C22orf34Q6ZV56 151 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 SLC29A4Q7RTT9 530 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 MAVSQ7Z434 540 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 CMC1Q7Z7K0 106 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 SATL1Q86VE3 508 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 PUSL1Q8N0Z8 303 aaKnown RBP4.59□□□□□ -1.68
CCDC39-205ENST00000485055 OR2L13Q8N349 312 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 Q8N402 240 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM251Q8N6I4 163 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 SSMEM1Q8WWF3 244 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 MARC2Q969Z3 335 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 FAM136AQ96C01 138 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 TEAD3Q99594 435 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 MACROD1Q9BQ69 325 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 WDR41Q9HAD4 459 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM45AQ9NWC5 275 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 C1RLQ9NZP8 487 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 VPS29Q9UBQ0 182 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 RNF11Q9Y3C5 154 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 FAM215AQ9Y5M1 114 aa4.59□□□□□ -1.68
CCDC39-205ENST00000485055 LOC400499M0QZD8 3231 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 DOPEY1Q5JWR5 2465 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PPIAL4CA0A0B4J2A2 164 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1B0GV90 55 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM213A2RRL7 107 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PINLYPA6NC86 204 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CXorf65A6NEN9 183 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SYNGR3O43761 229 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 EEDO75530 441 aaKnown RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 OR2J2O76002 312 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SCGNO76038 276 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 DIRAS1O95057 198 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ANP32DO95626 131 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PPIAL4GP0DN37 164 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 GFAPP14136 432 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF17P17021 662 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 HTR1EP28566 365 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SSR2P43308 183 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 EMDP50402 254 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ZP4Q12836 540 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms