RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CSPG4P5Q96PW8 444 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 SLIRPQ9GZT3 109 aaKnown RBP1.01□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF442Q9H7R0 627 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 MYOZ1Q9NP98 299 aaPredicted RBP1.01□□□□□ -2.25
SCAF11-207ENST00000484275 LGALS13Q9UHV8 139 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 RWDD2AQ9UIY3 292 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 STARD10Q9Y365 291 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 LRRC42Q9Y546 428 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 XKRY2A2RUG3 117 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 CCDC169A6NNP5 214 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 CHMP2AO43633 222 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 CDC40O60508 579 aaKnown RBP eCLIP1□□□□□ -2.25
SCAF11-207ENST00000484275 WBP4O75554 376 aaKnown RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 FLOT1O75955 427 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 SNX4O95219 450 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 SERPINA3P01011 423 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 MT-ND4P03905 459 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 TROVE2P10155 538 aaKnown RBP eCLIP1□□□□□ -2.25
SCAF11-207ENST00000484275 IFI30P13284 250 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF24P17028 368 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 TNNI1P19237 187 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 TAGLN2P37802 199 aaKnown RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 NAA10P41227 235 aaPredicted RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 TNNT2P45379 298 aaPredicted RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 ACOT2P49753 483 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 STXBP1P61764 594 aaKnown RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 RNASEKQ6P5S7 137 aaKnown RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 TMEM107Q6UX40 140 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 OR7G2Q8NG99 324 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 OR1L1Q8NH94 360 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 CMTM2Q8TAZ6 248 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 PLIN2Q99541 437 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 ILKAPQ9H0C8 392 aaPredicted RBP1□□□□□ -2.25
SCAF11-207ENST00000484275 DUSP21Q9H596 190 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 HRASLS2Q9NWW9 162 aa1□□□□□ -2.25
SCAF11-207ENST00000484275 VWA8A3KMH1 1905 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 HEATR9A2RTY3 570 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 PDZK1P1A8MUH7 402 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 AQP9O43315 295 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 RAD51CO43502 376 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 IGKV1-16P04430 117 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 SERPINE2P07093 398 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 IL32P24001 234 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 RAB9AP51151 201 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 SEMG2Q02383 582 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 ILKQ13418 452 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF141Q15928 474 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 MAJINQ3KP22 176 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF660Q6AZW8 331 aaPredicted RBP0.99□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF470Q6ECI4 717 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 SPNS3Q6ZMD2 512 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 MBOAT2Q6ZWT7 520 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 FAM228AQ86W67 206 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 CBLN2Q8IUK8 224 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 SLC22A9Q8IVM8 553 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 OR4C5Q8NGB2 326 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 OR4C13Q8NGP0 309 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 KCNG3Q8TAE7 436 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 OR51E1Q8TCB6 317 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 RASD2Q96D21 266 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 CENPKQ9BS16 269 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 RACGAP1Q9H0H5 632 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 METTL7AQ9H8H3 244 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 ZNF302Q9NR11 478 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 PSMC3IPQ9P2W1 217 aaPredicted RBP0.99□□□□□ -2.25
SCAF11-207ENST00000484275 PISDQ9UG56 409 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 MCTS1Q9ULC4 181 aaKnown RBP0.99□□□□□ -2.25
SCAF11-207ENST00000484275 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
SCAF11-207ENST00000484275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 TRBV11-1A0A0K0K1C0 115 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 SMCO3A2RU48 225 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 GOLGA8OA6NCC3 632 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 SMCO2A6NFE2 343 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 LYRM9A8MSI8 78 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 C9JVG2 144 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 GOLGA8NF8WBI6 632 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 AIM2O14862 343 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 CLOCKO15516 846 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 CIB2O75838 187 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 GATBO75879 557 aaKnown RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 CPSF4O95639 269 aaKnown RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 MMP7P09237 267 aaPredicted RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 NELFEP18615 380 aaKnown RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 RRM2P31350 389 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 OTX1P32242 354 aaPredicted RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 LRRC74AQ0VAA2 488 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 BIKQ13323 160 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 IDI1Q13907 227 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 XKR7Q5GH72 579 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 ZFAND6Q6FIF0 208 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 APOBEC3HQ6NTF7 200 aaKnown RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 FAM43BQ6ZT52 329 aaPredicted RBP0.98□□□□□ -2.25
SCAF11-207ENST00000484275 MDP1Q86V88 176 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 CBR4Q8N4T8 237 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 AKR7LQ8NHP1 331 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 RAB3IL1Q8TBN0 382 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 ACMSDQ8TDX5 336 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 OR2V2Q96R30 315 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 OR4K3Q96R72 315 aa0.98□□□□□ -2.25
SCAF11-207ENST00000484275 DYRK4Q9NR20 520 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms