RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SH3RF2Q8TEC5 729 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 UBXN10Q96LJ8 280 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 FURINP09958 794 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 NR0B2Q15466 257 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 FAHD1Q6P587 224 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 VHLLQ6RSH7 139 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 Q6ZSR9 355 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LINC00346Q8IVM7 164 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 CMTM8Q8IZV2 173 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 OR1P1Q8NH06 330 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PLIN4Q96Q06 1357 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 IFITM10A6NMD0 228 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PRAMEF4O60810 478 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LEFTY1O75610 366 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 HOXD4P09016 255 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-207ENST00000483888 VGLL4Q14135 290 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 FAM69BQ5VUD6 431 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PPP1R35Q8TAP8 253 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LRFN3Q9BTN0 628 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 SLC38A9Q8NBW4 561 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PRRX2Q99811 253 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 FBXL17Q9UF56 701 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 KNTC1P50748 2209 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 SULT2B1O00204 365 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LIMS3P0CW19 117 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LIMS4P0CW20 117 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 CD1CP29017 333 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-207ENST00000483888 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PIGLQ9Y2B2 252 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PRRC2BQ5JSZ5 2229 aaKnown RBP9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ABOP16442 354 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 RIPPLY3P57055 190 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 DMWDQ09019 674 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LDLRAD3Q86YD5 345 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 RBM45Q8IUH3 476 aaKnown RBP9.33□□□□□ -0.92
COL12A1-207ENST00000483888 SLC6A18Q96N87 628 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 HAPLN2Q9GZV7 340 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 TECPR2O15040 1411 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 MYO16Q9Y6X6 1858 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 OR5B21A6NL26 309 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 TIMP2P16035 220 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 TPBGQ13641 420 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ABI3BPQ7Z7G0 1075 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 OLIG1Q8TAK6 271 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 CHAC2Q8WUX2 184 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ZCCHC14Q8WYQ9 949 aaKnown RBP9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ANGPTL4Q9BY76 406 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ASXL3Q9C0F0 2248 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ABHD16AO95870 558 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 WNT7BP56706 349 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 TCTAP57738 103 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 JAG1P78504 1218 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 GAMTQ14353 236 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 EXOSC7Q15024 291 aaKnown RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 BSXQ3C1V8 233 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 PIANPQ8IYJ0 282 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 CLEC18AA5D8T8 446 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ZNF264O43296 627 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ADAP1O75689 374 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ONECUT2O95948 504 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 PRLHRP49683 370 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 PCBP3P57721 371 aaKnown RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 CTAG1AP78358 180 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 CLEC18CQ8NCF0 446 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ERGIC1Q969X5 290 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 SYT11Q9BT88 431 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ECM29Q5VYK3 1845 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ZNF195O14628 629 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 NEURL1O76050 574 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 GPX2P18283 190 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 HTR1DP28221 377 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 OR1D4P47884 311 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 POU3F1Q03052 451 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 SMAD2Q15796 467 aaKnown RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 HEATR5BQ9P2D3 2071 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 H3BP45 60 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 ADAMTS4O75173 837 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 CSN1S1P47710 185 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 FAM3BP58499 235 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 PAFAH1B2P68402 229 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 RTN4RL1Q86UN2 441 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 SHISA4Q96DD7 197 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 FGF20Q9NP95 211 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 NALCNQ8IZF0 1738 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 RNGTTO60942 597 aaKnown RBP9.32□□□□□ -0.92
COL12A1-207ENST00000483888 BSGP35613 385 aa9.32□□□□□ -0.92
COL12A1-207ENST00000483888 TRA2BP62995 288 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms