RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 HACD1B0YJ81 288 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 H3BN98 237 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 BET1O15155 118 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 ERI3O43414 337 aaKnown RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC19A2O60779 497 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 YIF1AO95070 293 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 VAMP5O95183 116 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 TGM6O95932 706 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 TRBC1P01850 177 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 CRYGCP07315 174 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 CCDC172P0C7W6 258 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 GOLGA8HP0CJ92 632 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PGA4P0DJD7 388 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PGA3P0DJD8 388 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 CD37P11049 281 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 GFAPP14136 432 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PSMC3P17980 439 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 HTR1DP28221 377 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 NUP62P37198 522 aaPredicted RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 CLDN6P56747 220 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 TAS2R46P59540 309 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 ATP6V0D1P61421 351 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PRR3P79522 188 aaKnown RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC39A6Q13433 755 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 TSC22D1Q15714 1073 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 ZNF829Q3KNS6 432 aaPredicted RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SMUG1Q53HV7 270 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 FBXW9Q5XUX1 488 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR2W3Q7Z3T1 314 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 GPR26Q8NDV2 337 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR51L1Q8NGJ5 315 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR10G6Q8NH81 332 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 C15orf40Q8WUR7 153 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 MITD1Q8WV92 249 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 ZNF75CPQ92670 426 aaPredicted RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PTX4Q96A99 478 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SGTBQ96EQ0 304 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SCGB3A2Q96PL1 93 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR2AG1Q9H205 316 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 GAL3ST2Q9H3Q3 398 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 C12orf10Q9HB07 376 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PRSS16Q9NQE7 514 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 ZNF355PQ9NSJ1 428 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 BZW2Q9Y6E2 419 aaKnown RBP1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 TMEM14AQ9Y6G1 99 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PCM1Q15154 2024 aa1.93□□□□□ -2.1
NSMCE4A-210ENST00000483541 PCDH11XQ9BZA7 1347 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SMIM26A0A096LP01 95 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 IGHV3OR16-9A0A0B4J2B5 98 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 IGHV1-69DA0A0B4J2H0 117 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RAD51BO15315 384 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 NMT2O60551 498 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 REM1O75628 298 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC22A5O76082 557 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 LCA5LO95447 670 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SNAI1O95863 264 aaPredicted RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 PTHP01270 115 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 IGKV1-17P01599 117 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 APCSP02743 223 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 CATP04040 527 aaKnown RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 DCNP07585 359 aaKnown RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 TACSTD2P09758 323 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR8U9P0C7N5 309 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 CISD3P0C7P0 127 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 GABRG2P18507 467 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 PTNP21246 168 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 BMI1P35226 326 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 PSMC5P62195 406 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RPL23P62829 140 aaKnown RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC35D2Q76EJ3 337 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 MDP1Q86V88 176 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RIMKLAQ8IXN7 391 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 ARHGAP18Q8N392 663 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 ARRDC1Q8N5I2 433 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR5AR1Q8NGP9 310 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR6K6Q8NGW6 343 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 OR8U1Q8NH10 309 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SYNPRQ8TBG9 265 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RERGQ96A58 199 aaPredicted RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 FLYWCH2Q96CP2 140 aaKnown RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 AGMATQ9BSE5 352 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 ING2Q9H160 280 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 REEP1Q9H902 201 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RRAGDQ9NQL2 400 aaPredicted RBP1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 SIRT7Q9NRC8 400 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 RGS18Q9NS28 235 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 KPTNQ9Y664 436 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 COMMD3-BMI1R4GMX3 469 aa1.92□□□□□ -2.1
NSMCE4A-210ENST00000483541 AQRO60306 1485 aaKnown RBP eCLIP1.92□□□□□ -2.15e-9■■□□□ 12.2
NSMCE4A-210ENST00000483541 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 SBNO1A3KN83 1393 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 IGKV1-8A0A0C4DH67 115 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 A0A0U1RQV1 116 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 COLCA2A8K830 154 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 DNASE2O00115 360 aaPredicted RBP1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 CHST10O43529 356 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 SLC16A7O60669 478 aa1.91□□□□□ -2.1
NSMCE4A-210ENST00000483541 RAD1O60671 282 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms