RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
VARS-225ENST00000482996 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 KRT84Q9NSB2 600 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 TVP23BQ9NYZ1 205 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 CUBNO60494 3623 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 IGHV3-64DA0A0J9YX35 117 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 G3V2T6 193 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 GMDSO60547 372 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 SELENOFO60613 162 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 CYB5R3P00387 301 aaPredicted RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 LYNP07948 512 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 CA6P23280 308 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 CFL1P23528 166 aaKnown RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 CPT2P23786 658 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 DDOSTP39656 456 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 OPRL1P41146 370 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 CD200P41217 278 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 GATA4P43694 442 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 DAPP51397 102 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 LCN2P80188 198 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 MZT1Q08AG7 82 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 LCN1P1Q5VSP4 162 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 KLBQ86Z14 1044 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 ZDHHC13Q8IUH4 622 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 RFLNBQ8N5W9 214 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 SPERTQ8NA61 448 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 OR56B2PQ8NGI1 322 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 OR52H1Q8NGJ2 320 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 OTOSQ8NHW6 89 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 THEM6Q8WUY1 208 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 DUS3LQ96G46 650 aaKnown RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 ADAT1Q9BUB4 502 aaKnown RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 OR10A2Q9H208 303 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 MRPL15Q9P015 296 aaKnown RBP11.68□□□□□ -0.54
VARS-225ENST00000482996 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 FBN3Q75N90 2809 aa11.68□□□□□ -0.54
VARS-225ENST00000482996 C5orf63A6NC05 138 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 NAA10P41227 235 aaPredicted RBP11.67□□□□□ -0.54
VARS-225ENST00000482996 ZNF121P58317 390 aaPredicted RBP11.67□□□□□ -0.54
VARS-225ENST00000482996 MAB21L1Q13394 359 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 RIPK1Q13546 671 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 APOFQ13790 326 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
VARS-225ENST00000482996 RCN1Q15293 331 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 BBS1Q8NFJ9 593 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 SPATA3Q8NHX4 192 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 PGAM5Q96HS1 289 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 AMELYQ99218 206 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 RASSF4Q9H2L5 321 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 METTL17Q9H7H0 456 aaPredicted RBP11.67□□□□□ -0.54
VARS-225ENST00000482996 FN3KRPQ9HA64 309 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 DNAJC27Q9NZQ0 273 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
VARS-225ENST00000482996 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PPIAL4CA0A0B4J2A2 164 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 ANKRD30BLA7E2S9 258 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 CEACAM18A8MTB9 384 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 F5H0A9 414 aaPredicted RBP11.66□□□□□ -0.54
VARS-225ENST00000482996 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 TCF21O43680 179 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 FSTL3O95633 263 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 BAG2O95816 211 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PPIAL4FP0DN26 164 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 SLC2A5P22732 501 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
VARS-225ENST00000482996 SNCBQ16143 134 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 ESCO2Q56NI9 601 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PRAMEF6Q5VXH4 476 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 SLC16A9Q7RTY1 509 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 AMIGO2Q86SJ2 522 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PLPP7Q8NBV4 271 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 Q8TCH9 128 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PYDC1Q8WXC3 89 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 LRTOMTQ8WZ04 291 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 REEP6Q96HR9 211 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 TMPRSS13Q9BYE2 586 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 GABARAPL1Q9H0R8 117 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 NIPAL2Q9H841 368 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 TMEM165Q9HC07 324 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 UFSP2Q9NUQ7 469 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
VARS-225ENST00000482996 LOC105371242A0A075B767 164 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 MITFO75030 526 aaPredicted RBP11.65□□□□□ -0.54
VARS-225ENST00000482996 FAM20BO75063 409 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 ZNF205O95201 554 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.54
VARS-225ENST00000482996 ANOS1P23352 680 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms