RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TTTY10Q9BZA0 68 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 SLC22A4Q9H015 551 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 ZNF275Q9NSD4 429 aaPredicted RBP17.75■□□□□ 0.43
SEC13-217ENST00000482647 ZNF319Q9P2F9 582 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 NKX1-2Q9UD57 310 aaPredicted RBP17.75■□□□□ 0.43
SEC13-217ENST00000482647 AASSQ9UDR5 926 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 NOP16Q9Y3C1 178 aaKnown RBP17.75■□□□□ 0.43
SEC13-217ENST00000482647 A0A096LNT2 108 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 A0A1W2PQL4 384 aaPredicted RBP17.74■□□□□ 0.43
SEC13-217ENST00000482647 H0YHG0 523 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 RP2O75695 350 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 GFOD2Q3B7J2 385 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 DHRSXQ8N5I4 330 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 SMR3AQ99954 134 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 MRPL15Q9P015 296 aaKnown RBP17.74■□□□□ 0.43
SEC13-217ENST00000482647 ZNF391Q9UJN7 358 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 PCDHGB1Q9Y5G3 927 aa17.74■□□□□ 0.43
SEC13-217ENST00000482647 A0A1B0GWJ7 208 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 PPIHO43447 177 aaKnown RBP17.73■□□□□ 0.43
SEC13-217ENST00000482647 KRT8P05787 483 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 GPR6P46095 362 aaPredicted RBP17.73■□□□□ 0.43
SEC13-217ENST00000482647 SRP9P49458 86 aaKnown RBP17.73■□□□□ 0.43
SEC13-217ENST00000482647 MMP16P51512 607 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 ACTC1P68032 377 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 ACTA1P68133 377 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 FAM3AP98173 230 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 IL5RAQ01344 420 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 CLEC9AQ6UXN8 241 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 OR10AD1Q8NGE0 317 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 CCL17Q92583 94 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 OR2V2Q96R30 315 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 GSX1Q9H4S2 264 aaPredicted RBP17.73■□□□□ 0.43
SEC13-217ENST00000482647 RNPEPL1Q9HAU8 725 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 FAM206AQ9NX38 181 aa17.73■□□□□ 0.43
SEC13-217ENST00000482647 MRM2Q9UI43 246 aaKnown RBP17.73■□□□□ 0.43
SEC13-217ENST00000482647 H0YL77 283 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 MAGEB4O15481 346 aaPredicted RBP17.72■□□□□ 0.43
SEC13-217ENST00000482647 SULT1C4O75897 302 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 CA6P23280 308 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 SLC3A1Q07837 685 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 OR8B12Q8NGG6 310 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 OR56B2PQ8NGI1 322 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 ITLN1Q8WWA0 313 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 PBOV1Q9GZY1 135 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 RPL36Q9Y3U8 105 aaKnown RBP17.72■□□□□ 0.43
SEC13-217ENST00000482647 CACNG2Q9Y698 323 aa17.72■□□□□ 0.43
SEC13-217ENST00000482647 IGHV4-61A0A0C4DH41 118 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 hCG_38984A0A1B0GV85 526 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 METTL15A6NJ78 407 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 ANKRD30BLA7E2S9 258 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 MLNRO43193 412 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 GMDSO60547 372 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 LY6G6DO95868 133 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 DBTP11182 482 aaKnown RBP17.71■□□□□ 0.43
SEC13-217ENST00000482647 GSK3AP49840 483 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 CHN2P52757 468 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 ADARB1P78563 741 aaKnown RBP17.71■□□□□ 0.43
SEC13-217ENST00000482647 IL18R1Q13478 541 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 OR8G1Q15617 311 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 SNCBQ16143 134 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 SPRNQ5BIV9 151 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 ZNF691Q5VV52 312 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 PLEKHG7Q6ZR37 379 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 SSX6Q7RTT6 188 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 YIPF7Q8N8F6 280 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 SETD9Q8NE22 299 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 TIMD4Q96H15 378 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 ADI1Q9BV57 179 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 TREM2Q9NZC2 230 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 EXOGQ9Y2C4 368 aaKnown RBP17.71■□□□□ 0.43
SEC13-217ENST00000482647 R4GMQ9 66 aa17.71■□□□□ 0.43
SEC13-217ENST00000482647 A0A0U1RQV5 110 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 DAPL1A0PJW8 107 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 CLDN25C9JDP6 229 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 F5H5P2 479 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 LOC110117498-PIK3R3F6TDL0 507 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 H0YAE9 185 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 J3QRE1 110 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 CLIC3O95833 236 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 TACSTD2P09758 323 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 ZNF91Q05481 1191 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 TMEM249Q2WGJ8 235 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 PEG10Q86TG7 708 aaKnown RBP17.7■□□□□ 0.42
SEC13-217ENST00000482647 KLBQ86Z14 1044 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 FTMTQ8N4E7 242 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 ACBD7Q8N6N7 88 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 CSNK2A3Q8NEV1 391 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 APH1BQ8WW43 257 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 RAB1CQ92928 201 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 ITFG2Q969R8 447 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 LGALS12Q96DT0 336 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 MEGF10Q96KG7 1140 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 SIGLEC11Q96RL6 698 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 MYCBPQ99417 103 aaPredicted RBP17.7■□□□□ 0.42
SEC13-217ENST00000482647 MOB1AQ9H8S9 216 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 AMBNQ9NP70 447 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 NUFIP1Q9UHK0 495 aaKnown RBP17.7■□□□□ 0.42
SEC13-217ENST00000482647 PPP1R3CQ9UQK1 317 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 SNX5Q9Y5X3 404 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms