RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 VKORC1L1Q8N0U8 176 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 TMEM256Q8N2U0 113 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 CSGALNACT2Q8N6G5 542 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 GLYATL2Q8WU03 294 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 C1orf198Q9H425 327 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 RRAGDQ9NQL2 400 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-210ENST00000482158 RGS18Q9NS28 235 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 SIGLEC9Q9Y336 463 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 TTC41PQ6P2S7 1318 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 GPR179Q6PRD1 2367 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 ANKRD65E5RJM6 399 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 K7EM74 188 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TNFRSF11BO00300 401 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 SIVA1O15304 175 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 AKR7A2O43488 359 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TDP2O95551 362 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 HLA-DQB1P01920 261 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TCP1P17987 556 aaKnown RBP3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TUBG1P23258 451 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 ME2P23368 584 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PPICP45877 212 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TAS2R46P59540 309 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PITPNAQ00169 270 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF616Q08AN1 781 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 SIGLEC14Q08ET2 396 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 GABRA6Q16445 453 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 NEGR1Q7Z3B1 354 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TTLQ8NG68 377 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 RAB1CQ92928 201 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PEX13Q92968 403 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 HAUS1Q96CS2 278 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PAIP2Q9BPZ3 127 aaKnown RBP3.08□□□□□ -1.92
SF3B1-210ENST00000482158 CALN1Q9BXU9 219 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PXMP2Q9NR77 195 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 TUBG2Q9NRH3 451 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
SF3B1-210ENST00000482158 PIK3R4Q99570 1358 aa3.08□□□□□ -1.92
SF3B1-210ENST00000482158 A0A1W2PRD5 423 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 NCF1BA6NI72 391 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 NCF1CA8MVU1 366 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 IGHV3-11P01762 117 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 CD5P06127 495 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 GLAP06280 429 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 KRT16P08779 473 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF14P17017 642 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 CLDN8P56748 225 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 DMTNQ08495 405 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 SLC39A6Q13433 755 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 PNOCQ13519 176 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 SHHQ15465 462 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 PRSS8Q16651 343 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF829Q3KNS6 432 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 H3F3CQ6NXT2 135 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 BBOF1Q8ND07 529 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF75CPQ92670 426 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 ITFG2Q969R8 447 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 C9orf72Q96LT7 481 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 RSG1Q9BU20 258 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 C8orf33Q9H7E9 229 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 EXOSC4Q9NPD3 245 aaKnown RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 PRSS16Q9NQE7 514 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 DDX18Q9NVP1 670 aaKnown RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 CAB39Q9Y376 341 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-210ENST00000482158 MROH7Q68CQ1 1323 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 COL1A2P08123 1366 aa3.07□□□□□ -1.92
SF3B1-210ENST00000482158 TMEM120BA0PK00 339 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 OR5H1A6NKK0 313 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF99A8MXY4 864 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-210ENST00000482158 SLC16A7O60669 478 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 SERPINB7O75635 380 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 SCELO95171 688 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 GZMAP12544 262 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 TALDO1P37837 337 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 CCNG1P51959 295 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 TMEM94Q12767 1356 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 AP1ARQ63HQ0 302 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 UNQ9165/PRO28630Q6UXU0 137 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF645Q8N7E2 425 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 GATSQ8NAP1 163 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 OR4M1Q8NGD0 313 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 CA5BP1Q8WTZ4 195 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 RMI2Q96E14 147 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 OSBPL11Q9BXB4 747 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 CD209Q9NNX6 404 aa3.06□□□□□ -1.92
SF3B1-210ENST00000482158 FBXO6Q9NRD1 293 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-210ENST00000482158 C2orf16Q68DN1 1984 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 SCN4AP35499 1836 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 TRAV6A0A075B6T7 132 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 IGKV6-21A0A0C4DH24 114 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 CENPVL3A0A0U1RRI6 287 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 A0A1B0GTQ1 180 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 SERPINE3A8MV23 424 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 H0YIV9 168 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 RAD1O60671 282 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 DCNP07585 359 aaKnown RBP3.05□□□□□ -1.92
SF3B1-210ENST00000482158 STAG3L3P0CL85 134 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 CD82P27701 267 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 610 ms