RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	DCTN6	O00399	190 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	SOCS2	O14508	198 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	GPR137B	O60478	399 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	KRT34	O76011	436 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	PTBP3	O95758	552 aa	Known RBP	7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TXNDC12	O95881	172 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	IGHV1-69	P01742	117 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	ACSM4	P0C7M7	580 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	CDKN2A	P42771	156 aa	Known RBP	7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	FXYD6P3	P58550	94 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	LSAMP	Q13449	338 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	MAPRE2	Q15555	327 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	KCNJ8	Q15842	424 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	MEP1B	Q16820	701 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	PRAMEF6	Q5VXH4	476 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	CORO6	Q6QEF8	472 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	DPY19L2P2	Q6ZN68	376 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TSEN54	Q7Z6J9	526 aa	Known RBP	7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	LDLRAD3	Q86YD5	345 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	PNLDC1	Q8NA58	520 aa	Known RBP	7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLC7A13	Q8TCU3	470 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TSSK2	Q96PF2	358 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TECTB	Q96PL2	329 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TMEM120A	Q9BXJ8	343 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	TRIM15	Q9C019	465 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLC22A4	Q9H015	551 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	SIRPD	Q9H106	197 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	SAR1A	Q9NR31	198 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	UFSP2	Q9NUQ7	469 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	CMTM6	Q9NX76	183 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	FAM53C	Q9NYF3	392 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	RNF7	Q9UBF6	113 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	AP3M1	Q9Y2T2	418 aa		7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096	PRKDC	P78527	4128 aa	Known RBP	7.1	□□□□□ -1.27
UBE2F-222	ENST00000482096		A0A1W2PRQ8	180 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	HMGB1P1	B2RPK0	211 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096		F5H5K5	113 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	CXCR6	O00574	342 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ADAM20	O43506	726 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	NDUFA2	O43678	99 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	PPP1R3D	O95685	299 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ZNF682	O95780	498 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	IGHV4-59	P01825	116 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	MDH1	P40925	334 aa	Known RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	IER3	P46695	156 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	OMP	P47874	163 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	CENPA	P49450	140 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	RPS6KA3	P51812	740 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	HOXA4	Q00056	320 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ECH1	Q13011	328 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	MALL	Q13021	153 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	DGCR6	Q14129	220 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	METTL11B	Q5VVY1	283 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SFRP4	Q6FHJ7	346 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLC18B1	Q6NT16	456 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	DNM1P34	Q6PK57	102 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	FKBP9P1	Q75LS8	142 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	PGAP1	Q75T13	922 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	NAA40	Q86UY6	237 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLC15A3	Q8IY34	581 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	OR6V1	Q8N148	313 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLC26A10	Q8NG04	563 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	LHX4	Q969G2	390 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SLCO4A1	Q96BD0	722 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	RSRC1	Q96IZ7	334 aa	Known RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	PITX2	Q99697	317 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	MMADHC	Q9H3L0	296 aa	Predicted RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	FN3KRP	Q9HA64	309 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	SMURF1	Q9HCE7	757 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	TRIM36	Q9NQ86	728 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	B9D1	Q9UPM9	204 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	NOP16	Q9Y3C1	178 aa	Known RBP	7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	ENPP4	Q9Y6X5	453 aa		7.09	□□□□□ -1.27
UBE2F-222	ENST00000482096	TRAV38-1	A0A0B4J264	116 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096		A0A0U1RQK1	487 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	OOEP	A6NGQ2	149 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	CD300LB	A8K4G0	201 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	PAX4	O43316	350 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	GMDS	O60547	372 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	FCN3	O75636	299 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	TSPAN15	O95858	294 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	ECD	O95905	644 aa	Predicted RBP	7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	SERPINA1	P01009	418 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	LCAT	P04180	440 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	H1F0	P07305	194 aa	Known RBP	7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	CA6	P23280	308 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	TPTE	P56180	551 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	ARF6	P62330	175 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	LIPE	Q05469	1076 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	TRAP1	Q12931	704 aa	Known RBP	7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	OR8G1	Q15617	311 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	SLC36A3	Q495N2	470 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	GDPGP1	Q6ZNW5	385 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	CFAP77	Q6ZQR2	320 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096		Q6ZSV7	163 aa		7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	MRPL21	Q7Z2W9	205 aa	Known RBP	7.08	□□□□□ -1.28
UBE2F-222	ENST00000482096	ARPIN	Q7Z6K5	226 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms