RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TMEM230Q96A57 120 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 CLCF1Q9UBD9 225 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 RGPD3A6NKT7 1758 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 APEX1P27695 318 aaKnown RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 GABRG1Q8N1C3 465 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 SCN7AQ01118 1682 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 ERVFC1P60507 584 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 UBE2MP61081 183 aaKnown RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 PDZK1IP1Q13113 114 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 FAM53BQ14153 422 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 DUSP5Q16690 384 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 SPANXN5Q5MJ07 72 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 TMEM102Q8N9M5 508 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 APOBEC3DQ96AK3 386 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 PELI1Q96FA3 418 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 Q96M85 177 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 GPR37O15354 613 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 SMAD4Q13485 552 aaKnown RBP8.68□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF740Q8NDX6 193 aa8.68□□□□□ -1.02
VEGFA-212ENST00000480614 EDN3P14138 238 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 PPIAP62937 165 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 TMEM81Q6P7N7 255 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 FAM26EQ8N5C1 309 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 LKAAEAR1Q8TD35 194 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 DDOQ99489 341 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RAB18Q9NP72 206 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 GPR173Q9NS66 373 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ARRB2P32121 409 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RPS16P62249 146 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 UQCC3Q6UW78 93 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 FA2HQ7L5A8 372 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 CADM3Q8N126 398 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 IFI44Q8TCB0 444 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 SLC25A19Q9HC21 320 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 TMEM30CPA0ZSE6 113 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ABLIM3O94929 683 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 PPICP45877 212 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 BTNL3Q6UXE8 466 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 OR2A1Q8NGT9 310 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 FBXO4Q9UKT5 387 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 COA3Q9Y2R0 106 aaPredicted RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RNASEK-C17orf49H0YIS7 233 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 PXNP49023 591 aaPredicted RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 DIO1P49895 249 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 FUT6P51993 359 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 IDSB3KWA1 339 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ACOT8O14734 319 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 QDPRP09417 244 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RPL7P18124 248 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 EXD3Q8N9H8 876 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ST8SIA4Q92187 359 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 BANF2Q9H503 90 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 CXorf51AA0A1B0GTR3 108 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 C5orf49A4QMS7 147 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 SULT1A3P0DMM9 295 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 SULT1A4P0DMN0 295 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 BCL2L2Q92843 193 aaPredicted RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ZMAT3Q9HA38 289 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 CGGBP1Q9UFW8 167 aaPredicted RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 DAPP1Q9UN19 280 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 A0A0B4J203 849 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF195O14628 629 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RPL3LQ92901 407 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ABCA3Q99758 1704 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 FRG2CA6NGY1 282 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 CD1CP29017 333 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 RNPS1Q15287 305 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 TRMT12Q53H54 448 aaKnown RBP8.67□□□□□ -1.02
VEGFA-212ENST00000480614 ARIH2OSQ8N7S6 290 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 UCK1Q9HA47 277 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 PRSS37A4D1T9 235 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 IQCJQ1A5X6 159 aa8.67□□□□□ -1.02
VEGFA-212ENST00000480614 CLEC18AA5D8T8 446 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 GOSR1O95249 250 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 RPL12P30050 165 aaKnown RBP8.66□□□□□ -1.02
VEGFA-212ENST00000480614 NOVP48745 357 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 SIRT6Q8N6T7 355 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 CLEC18CQ8NCF0 446 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 BHLHE23Q8NDY6 225 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 PDXPQ96GD0 296 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 HRASP01112 189 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 SHBQ15464 509 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 XKR7Q5GH72 579 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 TMEM268Q5VZI3 342 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 Q6ZPB1 254 aaPredicted RBP8.66□□□□□ -1.02
VEGFA-212ENST00000480614 PIGPP57054 158 aa8.66□□□□□ -1.02
VEGFA-212ENST00000480614 CGB2Q6NT52 195 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms