RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 RBMS3Q6XE24 437 aaKnown RBP12.89□□□□□ -0.35
CDK9-203ENST00000480353 BOLLQ8N9W6 283 aaKnown RBP12.89□□□□□ -0.35
CDK9-203ENST00000480353 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
CDK9-203ENST00000480353 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 C14orf119Q9NWQ9 140 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
CDK9-203ENST00000480353 POMPQ9Y244 141 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
CDK9-203ENST00000480353 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 TRIM77I1YAP6 450 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 AVPP01185 164 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 LYNP07948 512 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 CFL1P23528 166 aaKnown RBP12.88□□□□□ -0.35
CDK9-203ENST00000480353 ZFP36P26651 326 aaKnown RBP12.88□□□□□ -0.35
CDK9-203ENST00000480353 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
CDK9-203ENST00000480353 GATA4P43694 442 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 ACTG1P63261 375 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 PCK2Q16822 640 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 PRAMEF6Q5VXH4 476 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 TMEM179BQ7Z7N9 219 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 KLBQ86Z14 1044 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 SPERTQ8NA61 448 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 THEM6Q8WUY1 208 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
CDK9-203ENST00000480353 PGAM5Q96HS1 289 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
CDK9-203ENST00000480353 MMADHCQ9H3L0 296 aaPredicted RBP12.88□□□□□ -0.35
CDK9-203ENST00000480353 FAM20BO75063 409 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 GRPP07492 148 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 PSKH1P11801 424 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 PRKACGP22612 351 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 GNALP38405 381 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 DDOSTP39656 456 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
CDK9-203ENST00000480353 ZNF154Q13106 437 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 OR8B8Q15620 311 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 LINC01590Q5TEZ4 76 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 C1orf229Q6ZS94 237 aaPredicted RBP12.87□□□□□ -0.35
CDK9-203ENST00000480353 FAM57BQ71RH2 274 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 HS3ST5Q8IZT8 346 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 DEFB108BQ8NET1 73 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 OR52H1Q8NGJ2 320 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 DNAJC9Q8WXX5 260 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 DVL3Q92997 716 aaPredicted RBP12.87□□□□□ -0.35
CDK9-203ENST00000480353 REEP6Q96HR9 211 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 TMEM246Q9BRR3 403 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 ABHD6Q9BV23 337 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 TMEM165Q9HC07 324 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 TRIM36Q9NQ86 728 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 RNF7Q9UBF6 113 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
CDK9-203ENST00000480353 TCRBV3S1A0A5B6 114 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 F5H0A9 414 aaPredicted RBP12.86□□□□□ -0.35
CDK9-203ENST00000480353 PRODHO43272 600 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 ATP5HO75947 161 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 VENTXO95231 258 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 WNT2P09544 360 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 NAA10P41227 235 aaPredicted RBP12.86□□□□□ -0.35
CDK9-203ENST00000480353 PITPNBP48739 271 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 ZNF121P58317 390 aaPredicted RBP12.86□□□□□ -0.35
CDK9-203ENST00000480353 SNCBQ16143 134 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 ZNF404Q494X3 552 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 SLC35D3Q5M8T2 416 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 LRRN1Q6UXK5 716 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 Q8TCH9 128 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 ZFAND2BQ8WV99 257 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 SLC7A6OSQ96CW6 309 aaPredicted RBP12.86□□□□□ -0.35
CDK9-203ENST00000480353 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 PAPOLBQ9NRJ5 636 aaKnown RBP12.86□□□□□ -0.35
CDK9-203ENST00000480353 C1orf123Q9NWV4 160 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 INSIG2Q9Y5U4 225 aa12.86□□□□□ -0.35
CDK9-203ENST00000480353 A8MXK9 166 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 GSC2O15499 205 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 TIPRLO75663 272 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 ZNF12P17014 697 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 CDK5Q00535 292 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 MPPED2Q15777 294 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 FAM201AQ5SY85 155 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 LCN1P1Q5VSP4 162 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 PLPP7Q8NBV4 271 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 C19orf18Q8NEA5 215 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 C22orf15Q8WYQ4 148 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms