RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KLHL21Q9UJP4 597 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SAMHD1Q9Y3Z3 626 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ARHGAP32A7KAX9 2087 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 NKX6-3A6NJ46 265 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF878C9JN71 531 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 TRAPPC2LH3BP13 241 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 DCTN6O00399 190 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF593O00488 134 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 ARPC3O15145 178 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 XRCC2O43543 280 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 SNX3O60493 162 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 GMDSO60547 372 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 TOX4O94842 621 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 KNG1P01042 644 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 GYPBP06028 91 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 WNT2P09544 360 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 H2BFMP0C1H6 154 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 IGHV4-38-2P0DP08 117 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OMGP23515 440 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CFL1P23528 166 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 EEF1B2P24534 225 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CD80P33681 288 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 NAA10P41227 235 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 RPS27P42677 84 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CX3CR1P49238 355 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 ENTPD1P49961 510 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 NPY4RP50391 375 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 BLVRAP53004 296 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 GRB2P62993 217 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 FHL1Q13642 323 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 MICBQ29980 383 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF404Q494X3 552 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 KLHL12Q53G59 568 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 TMEM255AQ5JRV8 349 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 DRAM2Q6UX65 266 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 PDZD9Q8IXQ8 264 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CELF2-AS1Q8N7Q2 184 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OR9Q2Q8NGE9 314 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OR56B2PQ8NGI1 322 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OR10S1Q8NGN2 331 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 GATAD2BQ8WXI9 593 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 H1FXQ92522 213 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 SLAMF6Q96DU3 332 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 PGAM5Q96HS1 289 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 C7orf34Q96L11 122 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CCT8L2Q96SF2 557 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 MICU1Q9BPX6 476 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OR10A2Q9H208 303 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 OR51V1Q9H2C8 321 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 BEX1Q9HBH7 125 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 TMEM165Q9HC07 324 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 PDP1Q9P0J1 537 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CYB5R1Q9UHQ9 305 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 PRPF19Q9UMS4 504 aaKnown RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 GTF2A1LQ9UNN4 478 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 BAIAP2Q9UQB8 552 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 POLR3KQ9Y2Y1 108 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 CAB39Q9Y376 341 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 MMP24Q9Y5R2 645 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 SOX21Q9Y651 276 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-205ENST00000480127 NOTCH1P46531 2555 aa5.92□□□□□ -1.46
COL17A1-205ENST00000480127 PRKDCP78527 4128 aaKnown RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 IGHV3OR15-7A0A075B7D8 119 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 A0A1W2PQ09 198 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 OR6C68A6NDL8 312 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 OOEPA6NGQ2 149 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 A8MXK9 166 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 B2RBV5 119 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 LGALS8O00214 317 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 MLNRO43193 412 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ATP8B1O43520 1251 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 NDUFA2O43678 99 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 GYPAP02724 150 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 LIPFP07098 398 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ATP6V1B2P21281 511 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 CD200P41217 278 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 GSSP48637 474 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 CAPZA1P52907 286 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF92Q03936 586 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 DBPQ10586 325 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 POU4F2Q12837 409 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 PPP1R8Q12972 351 aaKnown RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 IKZF1Q13422 519 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 BLMHQ13867 455 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 MPPED2Q15777 294 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF181Q2M3W8 571 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 LRRC10Q5BKY1 277 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 GLYATL3Q5SZD4 288 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 WDR25Q64LD2 544 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 PGBD2Q6P3X8 592 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 C16orf87Q6PH81 154 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 BRICD5Q6PL45 260 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 FAM57BQ71RH2 274 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 RHOUQ7L0Q8 258 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 SLC36A1Q7Z2H8 476 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 DPY19L4Q7Z388 723 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 TIGD4Q8IY51 512 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 OR4F5Q8NH21 305 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms