RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PRAMEF6Q5VXH4 476 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 METTL27Q8N6F8 245 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 OR4S1Q8NGB4 309 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 ABHD5Q8WTS1 349 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 NUDT22Q9BRQ3 303 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 GPR84Q9NQS5 396 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 PLSCR3Q9NRY6 295 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC35D1Q9NTN3 355 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 LPAR3Q9UBY5 353 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 PITPNC1Q9UKF7 332 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 TERTO14746 1132 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 MT-ND6P03923 174 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 GUSBP08236 651 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 HNRNPA3P51991 378 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 FUT7Q11130 342 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM183BQ1AE95 376 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 CCSMST1Q4G0I0 132 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 FAM180BQ6P0A1 224 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 DPPA3Q6W0C5 159 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 ZBTB34Q8NCN2 500 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 CPEB3Q8NE35 698 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 OR5M1Q8NGP8 315 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 NMES1Q9C002 83 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 OBP2BQ9NPH6 170 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
PRPF4B-205ENST00000480058 ALG1L2C9J202 215 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 POU2F2P09086 479 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 TBXA2RP21731 343 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 PPP1CBP62140 327 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 NTHL1P78549 312 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 TESK1Q15569 626 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 KIRREL2Q6UWL6 708 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 BCDIN3DQ7Z5W3 292 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 PCNPQ8WW12 178 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 APOBEC3DQ96AK3 386 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 BSCL2Q96G97 398 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 TOE1Q96GM8 510 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ADTRPQ96IZ2 230 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 EGLN1Q9GZT9 426 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 IL21Q9HBE4 155 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ATXN7L1Q9ULK2 861 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ICAM5Q9UMF0 924 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 TRBV11-1A0A0K0K1C0 115 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 DCTN6O00399 190 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 GALR2O43603 387 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 STAG3L2P0CL84 134 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 MMP9P14780 707 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 GABRA2P47869 451 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 P2RY1P47900 373 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CARD18P57730 90 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF273Q14593 569 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF77Q15935 545 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 PRSS36Q5K4E3 855 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF770Q6IQ21 691 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 RNF175Q8N4F7 328 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 C12orf76Q8N812 135 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 OR51F2Q8NH61 342 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 C11orf40Q8WZ69 217 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 VPS25Q9BRG1 176 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 UTP23Q9BRU9 249 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 SOX7Q9BT81 388 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 OR5V1Q9UGF6 321 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC17A4Q9Y2C5 497 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 V9GYH0 126 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 A0A1W2PPQ1 181 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 MYADML2A6NDP7 307 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 LRRC30A6NM36 301 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 DOK2O60496 412 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 PDCD6O75340 191 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 IGF2P01344 180 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 GDF1P27539 372 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CAPZBP47756 277 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 SULT1A2P50226 295 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 EEF1A2Q05639 463 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 EIF3IQ13347 325 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 OR8B8Q15620 311 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 IGFBP7Q16270 282 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ST3GAL2Q16842 350 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 KHDC3LQ587J8 217 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF687Q8N1G0 1237 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 MUC20Q8N307 709 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 OR5B3Q8NH48 314 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 C16orf52Q8NHV5 167 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 PBOV1Q9GZY1 135 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 MYOZ1Q9NP98 299 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 NOSIPQ9Y314 301 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 A0A0U1RQK1 487 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 SCRG1O75711 98 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 NRASP01111 189 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CXCL10P02778 98 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CNN1P51911 297 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 FAM3AP98173 230 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM71Q6P5X7 295 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 CPEB2Q7Z5Q1 589 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF429Q86V71 674 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 RBMXL3Q8N7X1 1067 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC37A2Q8TED4 501 aa5.55□□□□□ -1.52
PRPF4B-205ENST00000480058 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms