RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DYSFO75923 2080 aa12.07□□□□□ -0.48
ATG4B-218ENST00000479554 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 IDH3BO43837 385 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 HLA-DQA2P01906 255 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 TFAP2AP05549 437 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
ATG4B-218ENST00000479554 SRP9P49458 86 aaKnown RBP12.06□□□□□ -0.48
ATG4B-218ENST00000479554 DBPQ10586 325 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-218ENST00000479554 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 SLC18B1Q6NT16 456 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 ZNF773Q6PK81 442 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 LRRC28Q86X40 367 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-218ENST00000479554 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-218ENST00000479554 BHLHE23Q8NDY6 225 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 OR2AJ1Q8NGZ0 328 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 CNIH3Q8TBE1 160 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 MEGF10Q96KG7 1140 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 ATF6BQ99941 703 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 CDADC1Q9BWV3 514 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 HCAR1Q9BXC0 346 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 WDR76Q9H967 626 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 GCM1Q9NP62 436 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 SCN3BQ9NY72 215 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 NDUFA13Q9P0J0 144 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
ATG4B-218ENST00000479554 OR6C68A6NDL8 312 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 F5H5K5 113 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SOX14O95416 240 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 FSHBP01225 129 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SELEP16581 610 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SLC6A9P48067 706 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SEC61A1P61619 476 aaKnown RBP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 ECH1Q13011 328 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 ESCO2Q56NI9 601 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 CLEC12AQ5QGZ9 265 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 C12orf73Q69YU5 71 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 RPL13AP3Q6NVV1 102 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 BPIFB6Q8NFQ5 453 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 OR52L1Q8NGH7 329 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 OR52E2Q8NGJ4 325 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 ZNF420Q8TAQ5 688 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 TEX47Q8TBZ9 253 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 TRUB1Q8WWH5 349 aaKnown RBP12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SLC30A2Q9BRI3 323 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 C1QTNF5Q9BXJ0 243 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 FAM192AQ9GZU8 254 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 EGLN3Q9H6Z9 239 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 SLC25A19Q9HC21 320 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 CYB5R1Q9UHQ9 305 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
ATG4B-218ENST00000479554 CEACAM18A8MTB9 384 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 A8MXK9 166 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 H0YL77 283 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 MLNRO43193 412 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 MRPS14O60783 128 aaKnown RBP12.04□□□□□ -0.48
ATG4B-218ENST00000479554 FAM20BO75063 409 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 WBP4O75554 376 aaKnown RBP12.04□□□□□ -0.48
ATG4B-218ENST00000479554 ACSM4P0C7M7 580 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 GABRB1P18505 474 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 FPR2P25090 351 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 FMO3P31513 532 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 SNRPGP62308 76 aaKnown RBP12.04□□□□□ -0.48
ATG4B-218ENST00000479554 GINS1Q14691 196 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 ARMCX4Q5H9R4 360 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 TMEM236Q5W0B7 351 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 DEFB108BQ8NET1 73 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 C22orf15Q8WYQ4 148 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 GCDHQ92947 438 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-218ENST00000479554 UBE2FQ969M7 185 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 MRI1Q9BV20 369 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 TEX12Q9BXU0 123 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 PRRG3Q9BZD7 231 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 VCX3AQ9NNX9 186 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 PLCXD1Q9NUJ7 323 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 OR5V1Q9UGF6 321 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 KCNG2Q9UJ96 466 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-218ENST00000479554 AUP1Q9Y679 476 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 WNK2Q9Y3S1 2297 aa12.04□□□□□ -0.48
ATG4B-218ENST00000479554 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 SMIM31A0A1B0GVY4 71 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 F5H5P2 479 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms