RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZNF768Q9H5H4 540 aaKnown RBP12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PROCRQ9UNN8 238 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 TRAV17A0A0B4J275 112 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 TEX51A0A1B0GUA7 166 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PLPP3O14495 311 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 C1QBP02746 253 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 KIR2DL3P43628 341 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 EMP3P54852 163 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 RAC1P63000 192 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PRSS42Q7Z5A4 293 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF2Q9BSG1 426 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-208ENST00000478423 FAM234AQ9H0X4 552 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 OR2M5A3KFT3 312 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 LINC01387J3KSC0 135 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 XRCC3O43542 346 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 CD79BP40259 229 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ECI1P42126 302 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 HAAOP46952 286 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 CDC20Q12834 499 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 HNF4GQ14541 408 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ETFDHQ16134 617 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 HES3Q5TGS1 186 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 SLC51BQ86UW2 128 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 IGHV5-10-1A0A0J9YXX1 117 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 M0R296 226 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 GLSO94925 669 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-208ENST00000478423 MPZL1O95297 269 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 EPPINO95925 133 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 MT-CO2P00403 227 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 MSL3P1P0C860 447 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 SNCAP37840 140 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 RFX2P48378 723 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 CLINT1Q14677 625 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 RNLSQ5VYX0 342 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 SHEQ5VZ18 495 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 DEGS2Q6QHC5 323 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 GCM1Q9NP62 436 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 SPINT2O43291 252 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 HRH1P35367 487 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 F2RL1P55085 397 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 RAB1AP62820 205 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 TRIP6Q15654 476 aaKnown RBP12.73□□□□□ -0.37
NPHP4-208ENST00000478423 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 TMEM200AQ86VY9 491 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 HSD17B11Q8NBQ5 300 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 ST3GAL6Q9Y274 331 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 GALP22466 123 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 FXNQ16595 210 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF573Q86YE8 665 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 OIT3Q8WWZ8 545 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 MCHR2Q969V1 340 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 GFOD1Q9NXC2 390 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 TCFL5Q9UL49 500 aa12.73□□□□□ -0.37
NPHP4-208ENST00000478423 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 LUMP51884 338 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 GUCA2AQ02747 115 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 DPPA2Q7Z7J5 298 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 DEFB108BQ8NET1 73 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR4C16Q8NGL9 310 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 A0A0A6YYJ9 748 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 CLDN20P56880 219 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 TM4SF19Q96DZ7 209 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 WDR1O75083 606 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 CLDN1O95832 211 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 OR5H8P0DN80 308 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 NFYBP25208 207 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 SRD5A2P31213 254 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 MMP15P51511 669 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 TMEM217Q8N7C4 229 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 H1FXQ92522 213 aaKnown RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 DECR2Q9NUI1 292 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 GSTP1P09211 210 aaKnown RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 GALNSP34059 522 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 CDONQ4KMG0 1287 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 CRIPAKQ8N1N5 446 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 MARCH1Q8TCQ1 289 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 UPRTQ96BW1 309 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 ARPC5LQ9BPX5 153 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-208ENST00000478423 SDHAF2Q9NX18 166 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms