RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 APH1BQ8WW43 257 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 SPRYD4Q8WW59 207 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 NRG4Q8WWG1 115 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 RDH5Q92781 318 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 DVL3Q92997 716 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 REEP6Q96HR9 211 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 MNTQ99583 582 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ADI1Q9BV57 179 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 OR10A2Q9H208 303 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 GSX1Q9H4S2 264 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 C8orf4Q9NR00 106 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF275Q9NSD4 429 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 NKIRAS2Q9NYR9 191 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 MRM2Q9UI43 246 aaKnown RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ZDHHC8Q9ULC8 765 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 GTF2A1LQ9UNN4 478 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 F8P00451 2351 aa8.71□□□□□ -1.01
HDAC6-222ENST00000478095 VPS13CQ709C8 3753 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 IGHV4-61A0A0C4DH41 118 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 hCG_38984A0A1B0GV85 526 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 TMEM269A0A1B0GVZ9 245 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SNTNA6NMZ2 147 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 VWC2LB2RUY7 222 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 F5H5P2 479 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 NDUFS8O00217 210 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 MLNRO43193 412 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 MPZL2O60487 215 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 RP2O75695 350 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 RPP14O95059 124 aaKnown RBP8.71□□□□□ -1.02
HDAC6-222ENST00000478095 CD55P08174 381 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ADH4P08319 380 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 OR2T7P0C7T2 308 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 DBTP11182 482 aaKnown RBP8.71□□□□□ -1.02
HDAC6-222ENST00000478095 CA6P23280 308 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 NR4A2P43354 598 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ADARB1P78563 741 aaKnown RBP8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF85Q03923 595 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 CDK5R2Q13319 367 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 TMED1Q13445 227 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SMN1Q16637 294 aaKnown RBP8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF829Q3KNS6 432 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-222ENST00000478095 FAM209AQ5JX71 171 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF691Q5VV52 312 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 COMMD2Q86X83 199 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 YIPF7Q8N8F6 280 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 OR52H1Q8NGJ2 320 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 OR2T27Q8NH04 317 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ITLN1Q8WWA0 313 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 PPP1R14AQ96A00 147 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SPSB4Q96A44 273 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 LGALS12Q96DT0 336 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 OR2V2Q96R30 315 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 DIRC2Q96SL1 478 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SLC30A2Q9BRI3 323 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SOX7Q9BT81 388 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 EGLN1Q9GZT9 426 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 PBOV1Q9GZY1 135 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 VCXQ9H320 206 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 NARFLQ9H6Q4 476 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 NIPAL2Q9H841 368 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 SP140LQ9H930 580 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 CHODLQ9H9P2 273 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 TMEM100Q9NV29 134 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 FAM206AQ9NX38 181 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 DCAF16Q9NXF7 216 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 ITPR3Q14573 2671 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
HDAC6-222ENST00000478095 A0A096LNT2 108 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 PPIHO43447 177 aaKnown RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF254O75437 659 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 WBP4O75554 376 aaKnown RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 PNPP00491 289 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 KRT8P05787 483 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 GNAO1P09471 354 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 ACHEP22303 614 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 USF1P22415 310 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 TNFSF4P23510 183 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 CAPGP40121 348 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 CRYBB2P43320 205 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 GPR6P46095 362 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 AQP4P55087 323 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 FAM3AP98173 230 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 EGR3Q06889 387 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 RIN1Q13671 783 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 TP53I3Q53FA7 332 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 AVPI1Q5T686 147 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 TTC23Q5W5X9 447 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 Q71RC1 249 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 OR13G1Q8NGZ3 307 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 CCL17Q92583 94 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 Q96MT0 163 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 ADAT1Q9BUB4 502 aaKnown RBP8.7□□□□□ -1.02
HDAC6-222ENST00000478095 OPA3Q9H6K4 179 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms