RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SSX3Q99909 188 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 DCTN5Q9BTE1 182 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 FAM234AQ9H0X4 552 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 MRPL15Q9P015 296 aaKnown RBP16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 PRPF19Q9UMS4 504 aaKnown RBP16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 ADARB2-AS1A8MUL3 147 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 PPP1R3DO95685 299 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 GRPP07492 148 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 MUC1P15941 1255 aaPredicted RBP16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 ELF3P78545 371 aaPredicted RBP16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 LY6EQ16553 131 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 LRRC23Q53EV4 343 aaPredicted RBP16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 RABL3Q5HYI8 236 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 NANOGP8Q6NSW7 305 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 SLC18B1Q6NT16 456 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 MBOAT2Q6ZWT7 520 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 SLC36A1Q7Z2H8 476 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 NAA40Q86UY6 237 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 DTX3Q8N9I9 347 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 SLC7A13Q8TCU3 470 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 TSPEARQ8WU66 669 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 FNDC11Q9BVV2 318 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 NPFFR1Q9GZQ6 430 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 NRIP3Q9NQ35 241 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 RHCGQ9UBD6 479 aa16.5■□□□□ 0.23
PDLIM1-202ENST00000477757 BIRC6Q9NR09 4857 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 A0A087WUU8 490 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 IGLV1-36A0A0B4J1U3 117 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 SOCS2O14508 198 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 KRT34O76011 436 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 CD28P10747 220 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 MAGOHP61326 146 aaKnown RBP16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 LRRC75BQ2VPJ9 315 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 ERICH5Q6P6B1 374 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 DNM1P34Q6PK57 102 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 ZNF730Q6ZMV8 503 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 SLC26A10Q8NG04 563 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 OR51G2Q8NGK0 314 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 TPD52L3Q96J77 140 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 TSSK2Q96PF2 358 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 PITX2Q99697 317 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 PNRC2Q9NPJ4 139 aaKnown RBP16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 C14orf119Q9NWQ9 140 aa16.49■□□□□ 0.23
PDLIM1-202ENST00000477757 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 MEGF11A6BM72 1044 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 DCTN6O00399 190 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 FFAR1O14842 300 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 CHST1O43916 411 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 NDUFB2O95178 105 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 CRABP1P29762 137 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 GGT2P36268 569 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 MDH1P40925 334 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 YAP1P46937 504 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 CENPAP49450 140 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 ZNF92Q03936 586 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 MZT1Q08AG7 82 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 AANATQ16613 207 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 ZBTB37Q5TC79 503 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 CCBE1Q6UXH8 406 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 LIAT1Q6ZQX7 453 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 LINC00346Q8IVM7 164 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 C17orf50Q8WW18 174 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 METTL8Q9H825 291 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 RNPEPL1Q9HAU8 725 aa16.48■□□□□ 0.23
PDLIM1-202ENST00000477757 GGT3PA6NGU5 568 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 J3KTA2 159 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 M0R1W7 72 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 FXYD1O00168 92 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 ACOT8O14734 319 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 NDUFB3O43676 98 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 IGLL1P15814 213 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 CDKN2AP42771 156 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 TPTEP56180 551 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 IKZF1Q13422 519 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 SNAI3Q3KNW1 292 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 TBPL2Q6SJ96 375 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 TSEN54Q7Z6J9 526 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 WFDC9Q8NEX5 89 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 OR8J3Q8NGG0 315 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 OR2AE1Q8NHA4 323 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 WIPF2Q8TF74 440 aaPredicted RBP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 LRRC29Q8WV35 223 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 RORBQ92753 470 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 C12orf43Q96C57 262 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 AJUBAQ96IF1 538 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 SH3GL1Q99961 368 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 ZNF702PQ9H963 129 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 SERTAD4Q9NUC0 356 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 TMEM5Q9Y2B1 443 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 SNX13Q9Y5W8 968 aa16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 V9GYY5 206 aaPredicted RBP16.47■□□□□ 0.23
PDLIM1-202ENST00000477757 M0R135 149 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 BHLHE40O14503 412 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 TXNDC12O95881 172 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 IFNW1P05000 195 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 ANOS1P23352 680 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 KDELR2P33947 212 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms