RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 IGHV1OR15-9A0A0B4J2B8 117 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SPRY1O43609 319 aaPredicted RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 DBHP09172 617 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 CNR1P21554 472 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 IL32P24001 234 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 CD27P26842 260 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 DUSP1P28562 367 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SRYQ05066 204 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 FUT7Q11130 342 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 IKZF1Q13422 519 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 C11orf87Q6NUJ2 197 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 PEG10Q86TG7 708 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 CDC20BQ86Y33 519 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 PUSL1Q8N0Z8 303 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 OR5M9Q8NGP3 310 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 C11orf40Q8WZ69 217 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SGK3Q96BR1 496 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 AKR1E2Q96JD6 320 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 GAREM1Q9H706 876 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 AMDHD2Q9Y303 409 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
CMC1-209ENST00000477739 TICRRQ7Z2Z1 1910 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 ABCD4O14678 606 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 ARPC3O15145 178 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 FCGR2AP12318 317 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 NME1P15531 152 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 RAB3AP20336 220 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 PPICP45877 212 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 NOVA1P51513 510 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 CAV2P51636 162 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 ZNF41P51814 821 aaPredicted RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 RAB32Q13637 225 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SMCO1Q147U7 214 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 C5orf24Q7Z6I8 188 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 OR52N5Q8NH56 324 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SUCNR1Q9BXA5 334 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 TMEM59Q9BXS4 323 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 HIF3AQ9Y2N7 669 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 VSTM2BA6NLU5 285 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 DUX1O43812 170 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 RAMP1O60894 148 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 CSTBP04080 98 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 ARG1P05089 322 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 ZNF14P17017 642 aaPredicted RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 CASRP41180 1078 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 NPBWR1P48145 328 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 FHITP49789 147 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 SLC35D3Q5M8T2 416 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 CCDC36Q8IYA8 594 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 CLEC1AQ8NC01 280 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 APCDD1LQ8NCL9 501 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 OR5L1Q8NGL2 311 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 ZNF426Q9BUY5 554 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 MAGT1Q9H0U3 335 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 TLNRD1Q9H1K6 362 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 AKIRIN1Q9H9L7 192 aaPredicted RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 PLEK2Q9NYT0 353 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 KCNK7Q9Y2U2 307 aa8.7□□□□□ -1.02
CMC1-209ENST00000477739 HEATR1Q9H583 2144 aaKnown RBP8.7□□□□□ -1.02
CMC1-209ENST00000477739 TRAV14DV4A0A0A6YYC5 116 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 BLACEA4D250 179 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 SGCEO43556 437 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 PMS2P2O95744 297 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ZNF16P17020 682 aaPredicted RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 ZNF43P17038 809 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 EPHA1P21709 976 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 RBMXP38159 391 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 FASLGP48023 281 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 CLDN17P56750 224 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 IAH1Q2TAA2 248 aaPredicted RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 ABCA11PQ4W5N1 156 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 CLVS2Q5SYC1 327 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 RPL7L1Q6DKI1 246 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 SYT13Q7L8C5 426 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 C6orf201Q7Z4U5 140 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 PLXDC1Q8IUK5 500 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 C9orf40Q8IXQ3 194 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 SLC43A2Q8N370 569 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 OR5T1Q8NG75 326 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ALKBH4Q9NXW9 302 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 OR5AC2Q9NZP5 309 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ICAM5Q9UMF0 924 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 SPTBN1Q01082 2364 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 C5orf63A6NC05 138 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 CELA2AP08217 269 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 CPT2P23786 658 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ADH6P28332 368 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 AGTR1P30556 359 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 SLC37A1P57057 533 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 SNRPEP62304 92 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 HSD11B2P80365 405 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 HACD4Q5VWC8 232 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 ESX1Q8N693 406 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 PNLDC1Q8NA58 520 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 ZC3H10Q96K80 434 aaKnown RBP8.69□□□□□ -1.02
CMC1-209ENST00000477739 CNTNAP3BQ96NU0 1288 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
CMC1-209ENST00000477739 PLEKHJ1Q9NW61 149 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms