RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PCBP3P57721 371 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 RAE1P78406 368 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 ACSM3Q53FZ2 586 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PRAMEF17Q5VTA0 474 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 H1FOOQ8IZA3 346 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 C2orf73Q8N5S3 287 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 CASTOR1Q8WTX7 329 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 RGP1Q92546 391 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 C16orf58Q96GQ5 468 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PBDC1Q9BVG4 233 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 MKKSQ9NPJ1 570 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 SIRT4Q9Y6E7 314 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 F6UZH7 168 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 KNG1P01042 644 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 OR8U9P0C7N5 309 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC35G6P0C7Q6 338 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB28P51157 221 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PRRX1P54821 245 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC9A3R2Q15599 337 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PCGF3Q3KNV8 242 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF585AQ6P3V2 769 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 COMMD6Q7Z4G1 85 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 GBGT1Q8N5D6 347 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 OR4K14Q8NGD5 310 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 OR51F2Q8NH61 342 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 HAVCR1Q96D42 359 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 TMEM56Q96MV1 263 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 INPP5EQ9NRR6 644 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 KCNK6Q9Y257 313 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 POLR3KQ9Y2Y1 108 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 TMEM56-RWDD3S4R434 201 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 BHLHE40O14503 412 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 GIMD1P0DJR0 217 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 LIM2P55344 173 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 CNN3Q15417 329 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 OCIAD2Q56VL3 154 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 ARL9Q6T311 187 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 Q6ZRG5 221 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 OR13C5Q8NGS8 318 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 OR13C2Q8NGS9 318 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 OR51A7Q8NH64 312 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 APOBEC4Q8WW27 367 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 SNX22Q96L94 193 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 SOHLH2Q9NX45 425 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 ANGPT4Q9Y264 503 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 RBM7Q9Y580 266 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 UNC80Q8N2C7 3258 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 COL4A2P08572 1712 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM265A0A087WTH1 108 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 PRSS38A1L453 326 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 C22orf46C9J442 243 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 K7EPK0 472 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 PEX12O00623 359 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 LRP3O75074 770 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 OR5H8P0DN80 308 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 LIPCP11150 499 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 HNRNPA2B1P22626 353 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 PDLIM4P50479 330 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 UBE2KP61086 200 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 PPP2CBP62714 309 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 PPP2CAP67775 309 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 CYCSP99999 105 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 Q5PR19 223 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 BIVMQ86UB2 503 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 CLECL1Q8IZS7 167 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM71E2Q8N5Q1 922 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 AMER3Q8N944 861 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 RPUSD4Q96CM3 377 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 Q9N2J8 555 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 LANCL2Q9NS86 450 aa11.33□□□□□ -0.6
RTFDC1-207ENST00000477573 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 CLEC18AA5D8T8 446 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 C9orf172C9J069 976 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 NDUFV2P19404 249 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 DPP4P27487 766 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 AQP2P41181 271 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 MMP16P51512 607 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM33P57088 247 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 NFATC4Q14934 902 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 CLEC18CQ8NCF0 446 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms