RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 NOS3P29474 1203 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 CRABP1P29762 137 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SAA4P35542 130 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 MDH1P40925 334 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 CDKN2AP42771 156 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 TPTEP56180 551 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 LOXL3P58215 753 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ELF3P78545 371 aaPredicted RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 MZT1Q08AG7 82 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 TAF13Q15543 124 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 MICBQ29980 383 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC36A3Q495N2 470 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 IFI44LQ53G44 452 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 OXLD1Q5BKU9 147 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ARSJQ5FYB0 599 aaPredicted RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SAMD5Q5TGI4 173 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L9Q6RFH8 374 aaPredicted RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 PTCHD4Q6ZW05 846 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC36A1Q7Z2H8 476 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ADCK1Q86TW2 530 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 CALHM3Q86XJ0 350 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 RNF113BQ8IZP6 322 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 GCSAMQ8N6F7 178 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM216BQ8N7L0 139 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SPERTQ8NA61 448 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 OR51G2Q8NGK0 314 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 OR5R1Q8NH85 324 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 OR2T6Q8NHC8 308 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 FANK1Q8TC84 345 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 LRRC29Q8WV35 223 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SPTSSAQ969W0 71 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 PPP1R14AQ96A00 147 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF799Q96GE5 643 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 RSRC1Q96IZ7 334 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ERMAPQ96PL5 475 aaPredicted RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC22A4Q9H015 551 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 RPRD1BQ9NQG5 326 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 C14orf119Q9NWQ9 140 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 VSX1Q9NZR4 365 aaPredicted RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4Q9UBX2 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 RAB21Q9UL25 225 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM32AQ9Y421 112 aaKnown RBP5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 KPTNQ9Y664 436 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 LOC100653049A0A140TA62 436 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 UNC119BA6NIH7 251 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 ANKRD30BLA7E2S9 258 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 RNASEK-C17orf49H0YIS7 233 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 DCTN6O00399 190 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 FFAR1O14842 300 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 XPNPEP2O43895 674 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 KRT34O76011 436 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 MPIG6BO95866 241 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC2A1P11166 492 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF823P16415 610 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NDUFB7P17568 137 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 GRK5P34947 590 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC7A2P52569 658 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF92Q03936 586 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 MAPRE2Q15555 327 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 KCNMB1Q16558 191 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 PCK2Q16822 640 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 RFX4Q33E94 735 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 GFOD2Q3B7J2 385 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SNAI3Q3KNW1 292 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 LRRC10Q5BKY1 277 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 WDR38Q5JTN6 314 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 GLYATL3Q5SZD4 288 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 AGBL2Q5U5Z8 902 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC18B1Q6NT16 456 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SMARCD3Q6STE5 483 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 DPY19L2P2Q6ZN68 376 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 TMPRSS11FQ6ZWK6 438 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 DPY19L4Q7Z388 723 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 TSEN54Q7Z6J9 526 aaKnown RBP5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR6V1Q8N148 313 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SDR9C7Q8NEX9 313 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC26A10Q8NG04 563 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR4S1Q8NGB4 309 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR5T2Q8NGG2 359 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR56B2PQ8NGI1 322 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR4K13Q8NH42 304 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 OR52J3Q8NH60 311 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NPRL2Q8WTW4 380 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 TSPEARQ8WU66 669 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 RORBQ92753 470 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM162AQ96A26 154 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 R3HDM4Q96D70 268 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 HSH2DQ96JZ2 352 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NMNAT3Q96T66 252 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SSX3Q99909 188 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 COPS4Q9BT78 406 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 IFT27Q9BW83 186 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NRIP3Q9NQ35 241 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 SNTG1Q9NSN8 517 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 INTS9Q9NV88 658 aaKnown RBP5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 NECAP2Q9NVZ3 263 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 AURKAIP1Q9NWT8 199 aaPredicted RBP5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 GID8Q9NWU2 228 aa5.48□□□□□ -1.53
RTFDC1-206ENST00000477485 ADA2Q9NZK5 511 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms