RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ACER3Q9NUN7 267 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 DCAF16Q9NXF7 216 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 A0A0B4J203 849 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 FAM90A27PA6NNH2 459 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 CBR3O75828 277 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 ZDHHC11BP0C7U3 371 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 ENDOGQ14249 297 aaKnown RBP16.8■□□□□ 0.28
VARS2-209ENST00000477288 RPUSD3Q6P087 351 aaKnown RBP16.8■□□□□ 0.28
VARS2-209ENST00000477288 SLC25A26Q70HW3 274 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 CAMKMTQ7Z624 323 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 GPR119Q8TDV5 335 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 NIT2Q9NQR4 276 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 RPL12P30050 165 aaKnown RBP16.8■□□□□ 0.28
VARS2-209ENST00000477288 HRH1P35367 487 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 ACSM5Q6NUN0 579 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 VPS25Q9BRG1 176 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 SCPEP1Q9HB40 452 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 HINT3Q9NQE9 182 aaKnown RBP16.8■□□□□ 0.28
VARS2-209ENST00000477288 CMC2Q9NRP2 79 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 CLEC5AQ9NY25 188 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
VARS2-209ENST00000477288 SPRY1O43609 319 aaPredicted RBP16.79■□□□□ 0.28
VARS2-209ENST00000477288 FCMRO60667 390 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 H3F3AP84243 136 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 P4HTMQ9NXG6 502 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 SLC22A13Q9Y226 551 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 SERTM1A2A2V5 107 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 RBP4P02753 201 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 PGFP49763 221 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 PNLIPRP2P54317 469 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 PLPPR2Q96GM1 343 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 AMTP48728 403 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 SYT6Q5T7P8 510 aaPredicted RBP16.79■□□□□ 0.28
VARS2-209ENST00000477288 STUMQ69YW2 141 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 C17orf78Q8N4C9 275 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 DEFB124Q8NES8 71 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 ZNF230Q9UIE0 474 aaPredicted RBP16.79■□□□□ 0.28
VARS2-209ENST00000477288 CXorf67Q86X51 503 aaPredicted RBP16.79■□□□□ 0.28
VARS2-209ENST00000477288 NHLRC2Q8NBF2 726 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 AKR7LQ8NHP1 331 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 GIPP09681 153 aaPredicted RBP16.79■□□□□ 0.28
VARS2-209ENST00000477288 AGBL4Q5VU57 503 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 ANKRD34AQ69YU3 496 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 RAB18Q9NP72 206 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 NDUFB11Q9NX14 153 aa16.79■□□□□ 0.28
VARS2-209ENST00000477288 SOX15O60248 233 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 FZD2Q14332 565 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 Q56UQ5 140 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 LRRC10Q5BKY1 277 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ZNF586Q9NXT0 402 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ING1Q9UK53 422 aaPredicted RBP16.78■□□□□ 0.28
VARS2-209ENST00000477288 TRGV5A0A0B4J1U4 118 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 NDUFB3O43676 98 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 CTSLP07711 333 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 COX5AP20674 150 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 SUMO1P63165 101 aaKnown RBP16.78■□□□□ 0.28
VARS2-209ENST00000477288 HTRA4P83105 476 aaPredicted RBP16.78■□□□□ 0.28
VARS2-209ENST00000477288 SMIM21Q3B7S5 101 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ELFN2Q5R3F8 820 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 DHRS13Q6UX07 377 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 SRRQ9GZT4 340 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 R4GMQ9 66 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 OR2W5A6NFC9 320 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 METTL12A8MUP2 240 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ARNTP27540 789 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ZNF628Q5EBL2 1059 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 XKR7Q5GH72 579 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ARHGDIGQ99819 225 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 TXNIPQ9H3M7 391 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 FLVCR2Q9UPI3 526 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ST3GAL6Q9Y274 331 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 GPM6AP51674 278 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 PIGPP57054 158 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 OR2B8PP59922 312 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ZNF766Q5HY98 468 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 OR8B4Q96RC9 309 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 LRRC61Q9BV99 259 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 FBXO34Q9NWN3 711 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 ZNF629Q9UEG4 869 aaPredicted RBP16.78■□□□□ 0.28
VARS2-209ENST00000477288 SCGB1C2P0DMR2 95 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 SRP14P37108 136 aaKnown RBP16.78■□□□□ 0.28
VARS2-209ENST00000477288 DLEU7Q6UYE1 221 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 OR10V1Q8NGI7 309 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 SMIM7Q9BQ49 75 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 TNFRSF19Q9NS68 423 aa16.78■□□□□ 0.28
VARS2-209ENST00000477288 TAF1P21675 1872 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 LRRC3CA6NJW4 275 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 RFPL4AA6NLU0 287 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 RFPL4AL1F8VTS6 287 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 CEACAM5P06731 702 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
VARS2-209ENST00000477288 CDAP32320 146 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 DIO1P49895 249 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 EGR3Q06889 387 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 MARCH1Q8TCQ1 289 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 LOC102723971A0A1B0GUV8 181 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 TMEM129A0AVI4 362 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 ACOT8O14734 319 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 SCO1O75880 301 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 OR2F2O95006 317 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms