RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	PKP2	Q99959	881 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	UBAP1	Q9NZ09	502 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	MRPL15	Q9P015	296 aa	Known RBP	13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	ARHGAP32	A7KAX9	2087 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	DNHD1	Q96M86	4753 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	ATR	Q13535	2644 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	TRAV20	A0A0B4J274	112 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	hCG_38984	A0A1B0GV85	526 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	IFNL4	K9M1U5	179 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	TBX1	O43435	398 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	PTBP3	O95758	552 aa	Known RBP	13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	CYB5R3	P00387	301 aa	Predicted RBP	13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	MRPL3	P09001	348 aa	Known RBP	13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	H2BFM	P0C1H6	154 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	HNF1A	P20823	631 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	FAM3A	P98173	230 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF181	Q2M3W8	571 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	PRAMEF6	Q5VXH4	476 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	LRRN1	Q6UXK5	716 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	TMEM163	Q8TC26	289 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	DVL3	Q92997	716 aa	Predicted RBP	13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	REEP6	Q96HR9	211 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	OSBPL10	Q9BXB5	764 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	GABARAPL3	Q9BY60	117 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	PRRG3	Q9BZD7	231 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	YIPF3	Q9GZM5	350 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	SLC22A4	Q9H015	551 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	OPA3	Q9H6K4	179 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580	COPS3	Q9UNS2	423 aa		13.91	□□□□□ -0.18
VPS8-222	ENST00000475580		F5H0A9	414 aa	Predicted RBP	13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	EBAG9	O00559	213 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF205	O95201	554 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	IFNA2	P01563	188 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	APOC1	P02654	83 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	ANPEP	P15144	967 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	ZFP36	P26651	326 aa	Known RBP	13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	OR8G1	Q15617	311 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	MPPED2	Q15777	294 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	TIGD6	Q17RP2	521 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	FAM201A	Q5SY85	155 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	LCN1P1	Q5VSP4	162 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	NXNL2	Q5VZ03	156 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	RFLNB	Q8N5W9	214 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	OR52H1	Q8NGJ2	320 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580		Q8TCH9	128 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	IL4I1	Q96RQ9	567 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	ADAT1	Q9BUB4	502 aa	Known RBP	13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	SP140L	Q9H930	580 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	PATZ1	Q9HBE1	687 aa	Known RBP	13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	TMEM165	Q9HC07	324 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	BRD7	Q9NPI1	651 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	LAMP5	Q9UJQ1	280 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	LRP12	Q9Y561	859 aa		13.9	□□□□□ -0.18
VPS8-222	ENST00000475580	GMDS	O60547	372 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	FAM20B	O75063	409 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	AVP	P01185	164 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	PCMT1	P22061	227 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	MDH2	P40926	338 aa	Known RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	PSMA6	P60900	246 aa	Known RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	SEC61A1	P61619	476 aa	Known RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	HOXA4	Q00056	320 aa	Predicted RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	ZFP1	Q6P2D0	407 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	MEPCE	Q7L2J0	689 aa	Known RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	SPIC	Q8N5J4	248 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	PGAM5	Q96HS1	289 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	OR10A2	Q9H208	303 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	ENOPH1	Q9UHY7	261 aa		13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	FBN1	P35555	2871 aa	Known RBP	13.89	□□□□□ -0.19
VPS8-222	ENST00000475580	MXRA5	Q9NR99	2828 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	CEACAM18	A8MTB9	384 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	PSMD9	O00233	223 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	FSTL3	O95633	263 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	THBS2	P35442	1172 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	DDOST	P39656	456 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	GSK3A	P49840	483 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	LCN2	P80188	198 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	KRT77	Q7Z794	578 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	OR8B12	Q8NGG6	310 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	ERGIC1	Q969X5	290 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	LYZL4	Q96KX0	146 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	CNN2	Q99439	309 aa	Known RBP	13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	RBM4B	Q9BQ04	359 aa	Known RBP	13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	TMPRSS13	Q9BYE2	586 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	RIBC2	Q9H4K1	309 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	PPP1R3E	Q9H7J1	279 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	NIPAL2	Q9H841	368 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	ADGRL4	Q9HBW9	690 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	UFSP2	Q9NUQ7	469 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	NOP16	Q9Y3C1	178 aa	Known RBP	13.88	□□□□□ -0.19
VPS8-222	ENST00000475580	WNK2	Q9Y3S1	2297 aa		13.88	□□□□□ -0.19
VPS8-222	ENST00000475580		E9PQ18	207 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	PNP	P00491	289 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	ALPL	P05186	524 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	ROM1	Q03395	351 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	OR8B8	Q15620	311 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	GFOD2	Q3B7J2	385 aa		13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.87	□□□□□ -0.19
VPS8-222	ENST00000475580	DEGS2	Q6QHC5	323 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms