RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ECH1Q13011 328 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SLC10A1Q14973 349 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SLC16A14Q7RTX9 510 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 ACBD4Q8NC06 268 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 FAM46BQ96A09 425 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 OR10A2Q9H208 303 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 OR10A4Q9H209 315 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 OR51J1Q9H342 316 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SULT1C2O00338 296 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 NKX2-8O15522 239 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SYNGR3O43761 229 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 PEX14O75381 377 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 DHRS3O75911 302 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 PATE4P0C8F1 98 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 VSIG8P0DPA2 414 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 GTF2F2P13984 249 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF32P17041 273 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SSBP1Q04837 148 aaKnown RBP13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 MOGAT2Q3SYC2 334 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 C6orf183Q5T699 404 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 NOXA1Q86UR1 476 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF101Q8IZC7 436 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 PAQR4Q8N4S7 273 aaPredicted RBP13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 ZFP62Q8NB50 900 aaPredicted RBP13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 OR52H1Q8NGJ2 320 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 GPX8Q8TED1 209 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 HAS2Q92819 552 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 RNF170Q96K19 258 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 SLCO5A1Q9H2Y9 848 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 ZMAT3Q9HA38 289 aaKnown RBP13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 BEX1Q9HBH7 125 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 PARPBPQ9NWS1 579 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 FLVCR2Q9UPI3 526 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 MTRF1O75570 445 aaKnown RBP13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 LPLP06858 475 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 CRYGSP22914 178 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 SOX8P57073 446 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 ACTBP60709 375 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 PCBD1P61457 104 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 ACTG1P63261 375 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 MAB21L1Q13394 359 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 UNC119Q13432 240 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF766Q5HY98 468 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 TSPO2Q5TGU0 170 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 CDH26Q8IXH8 852 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 AKR7LQ8NHP1 331 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 FNDC9Q8TBE3 224 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 SEH1LQ96EE3 360 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 GPER1Q99527 375 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 EXO5Q9H790 373 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 CALHM2Q9HA72 323 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 NOX3Q9HBY0 568 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 MRPS28Q9Y2Q9 187 aaKnown RBP13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 V9GYS6 101 aa13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 EP300Q09472 2414 aaPredicted RBP13.46□□□□□ -0.25
RPUSD3-215ENST00000475470 FARS2O95363 451 aaKnown RBP13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 FCER2P06734 321 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 THBS4P35443 961 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 QRFPP83859 136 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 FCN2Q15485 313 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 LINC00303Q3SY05 128 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 GLIPR1L1Q6UWM5 242 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 CHMP1BQ7LBR1 199 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 RNF144BQ7Z419 303 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 CDH24Q86UP0 819 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 TUSC5Q8IXB3 177 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 BEST4Q8NFU0 473 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 LDAHQ9H6V9 325 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF552Q9H707 407 aaPredicted RBP13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 SCPEP1Q9HB40 452 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 ACKR4Q9NPB9 350 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 ARPC1BO15143 372 aaKnown RBP13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 ACTL6AO96019 429 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 YES1P07947 543 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 AKAIN1P0CW23 69 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 HTR5AP47898 357 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 VEGFCP49767 419 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 PSG4Q00888 419 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 SRSF6Q13247 344 aaKnown RBP13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 SNAI3Q3KNW1 292 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 SFRP5Q5T4F7 317 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF782Q6ZMW2 699 aaPredicted RBP13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 SKA3Q8IX90 412 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 TMEM178AQ8NBL3 297 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 CCDC54Q8NEL0 328 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 OR8S1Q8NH09 359 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 DEFB127Q9H1M4 99 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 PIGLQ9Y2B2 252 aa13.45□□□□□ -0.26
RPUSD3-215ENST00000475470 IGKV1-9A0A0C4DH69 117 aa13.44□□□□□ -0.26
RPUSD3-215ENST00000475470 FAHP16930 419 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms