RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MRASO14807 208 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 FFAR1O14842 300 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 NDUFB3O43676 98 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 PTP4A3O75365 173 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 RENP00797 406 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
SKA3-206ENST00000475251 GRPP07492 148 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 KIR2DS4P43632 304 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 ACSM1Q08AH1 577 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 IFI44LQ53G44 452 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 SLC18B1Q6NT16 456 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 CFAP77Q6ZQR2 320 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 FKBP9P1Q75LS8 142 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 SLC26A10Q8NG04 563 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 OR4S1Q8NGB4 309 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 OR2T6Q8NHC8 308 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 CFHR4Q92496 578 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 SGCDQ92629 289 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 ZNF799Q96GE5 643 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 FAM46AQ96IP4 442 aaKnown RBP10.34□□□□□ -0.75
SKA3-206ENST00000475251 SEMA6AQ9H2E6 1030 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 RANBP3Q9H6Z4 567 aaPredicted RBP10.34□□□□□ -0.75
SKA3-206ENST00000475251 RNPEPL1Q9HAU8 725 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 SIRT7Q9NRC8 400 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 KCNG2Q9UJ96 466 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 B9D1Q9UPM9 204 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 SNX13Q9Y5W8 968 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 PLXNB1O43157 2135 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 MEIOCA2RUB1 952 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 ZNF682O95780 498 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 LHBP01229 141 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 HLA-DQA2P01906 255 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 CDKN2AP42771 156 aaKnown RBP10.33□□□□□ -0.76
SKA3-206ENST00000475251 EFNB2P52799 333 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 HOXA4Q00056 320 aaPredicted RBP10.33□□□□□ -0.76
SKA3-206ENST00000475251 LRRC10Q5BKY1 277 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 VTCN1Q7Z7D3 282 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 LINC00346Q8IVM7 164 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 BEND2Q8NDZ0 799 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 OR4C15Q8NGM1 316 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 OR8S1Q8NH09 359 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 C12orf43Q96C57 262 aaKnown RBP10.33□□□□□ -0.76
SKA3-206ENST00000475251 RSRC1Q96IZ7 334 aaKnown RBP10.33□□□□□ -0.76
SKA3-206ENST00000475251 CLPTM1LQ96KA5 538 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 TSSK2Q96PF2 358 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 TMEM120AQ9BXJ8 343 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 CYB5R1Q9UHQ9 305 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 PRPF19Q9UMS4 504 aaKnown RBP10.33□□□□□ -0.76
SKA3-206ENST00000475251 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
SKA3-206ENST00000475251 IGLV1-36A0A0B4J1U3 117 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 A0A0G2JND7 137 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 DCTN6O00399 190 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 IMPA2O14732 288 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 TIPRLO75663 272 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 TROVE2P10155 538 aaKnown RBP eCLIP10.32□□□□□ -0.76
SKA3-206ENST00000475251 SAA4P35542 130 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 DDOSTP39656 456 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 NAA10P41227 235 aaPredicted RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 UBE2E1P51965 193 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 ZNF92Q03936 586 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 EMX1Q04741 257 aaPredicted RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 BLMHQ13867 455 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 RFX4Q33E94 735 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 PGBD2Q6P3X8 592 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 SMARCD3Q6STE5 483 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 DRAM2Q6UX65 266 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 NAA40Q86UY6 237 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 OR6V1Q8N148 313 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 KLHDC1Q8N7A1 406 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 SLC7A13Q8TCU3 470 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 ERMAPQ96PL5 475 aaPredicted RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
SKA3-206ENST00000475251 SRA1Q9HD15 236 aaKnown RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 PNRC2Q9NPJ4 139 aaKnown RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 FAM32AQ9Y421 112 aaKnown RBP10.32□□□□□ -0.76
SKA3-206ENST00000475251 IGHV3OR15-7A0A075B7D8 119 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 UNC119BA6NIH7 251 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 H3BUX3 64 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 M0R1W7 72 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 FCN3O75636 299 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 H1F0P07305 194 aaKnown RBP10.31□□□□□ -0.76
SKA3-206ENST00000475251 ZNF823P16415 610 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 SLC6A6P31641 620 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 DBPQ10586 325 aaPredicted RBP10.31□□□□□ -0.76
SKA3-206ENST00000475251 DGCR6Q14129 220 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 PCK2Q16822 640 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 SNAI3Q3KNW1 292 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 WDR38Q5JTN6 314 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 CBLL1Q75N03 491 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 ARPINQ7Z6K5 226 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 ZBTB46Q86UZ6 589 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 OR4F17Q8NGA8 305 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 OR51G2Q8NGK0 314 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms