RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MOB1AQ9H8S9 216 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 G6PC2Q9NQR9 355 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 INPP5EQ9NRR6 644 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 PLCXD1Q9NUJ7 323 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 MRPL15Q9P015 296 aaKnown RBP14.39□□□□□ -0.11
SCAF11-206ENST00000474828 R4GMQ9 66 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 TMEM269A0A1B0GVZ9 245 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 METTL15A6NJ78 407 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 APOL3O95236 402 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 ANXA2P07355 339 aaKnown RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 ATP6V1E1P36543 226 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 SMN1Q16637 294 aaKnown RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 ZNF829Q3KNS6 432 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 KLHL22Q53GT1 634 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 LIPNQ5VXI9 398 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 PLEKHG7Q6ZR37 379 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 FAM57BQ71RH2 274 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 MRPL21Q7Z2W9 205 aaKnown RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 C8orf59Q8N0T1 100 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 PLPP7Q8NBV4 271 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 OR10H4Q8NGA5 316 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 UBASH3BQ8TF42 649 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 RDH5Q92781 318 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 COX4I2Q96KJ9 171 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 SLC22A4Q9H015 551 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 VCX3BQ9H321 246 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 MSL2Q9HCI7 577 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 IL19Q9UHD0 177 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 METRNQ9UJH8 293 aa14.38□□□□□ -0.11
SCAF11-206ENST00000474828 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
SCAF11-206ENST00000474828 CHD3Q12873 2000 aaKnown RBP14.37□□□□□ -0.11
SCAF11-206ENST00000474828 PSMD9O00233 223 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 MAGEB4O15481 346 aaPredicted RBP14.37□□□□□ -0.11
SCAF11-206ENST00000474828 MLNRO43193 412 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 RRP9O43818 475 aaKnown RBP14.37□□□□□ -0.11
SCAF11-206ENST00000474828 FAM20BO75063 409 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 FADS2O95864 444 aaKnown RBP14.37□□□□□ -0.11
SCAF11-206ENST00000474828 KRT8P05787 483 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 ATP6V1B1P15313 513 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 SLC25A16P16260 332 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 ACHEP22303 614 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 PDLIM4P50479 330 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 GALEQ14376 348 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 CLEC2AQ6UVW9 174 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 THAP5Q7Z6K1 395 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 KLBQ86Z14 1044 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 ELMOD2Q8IZ81 293 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 SYS1Q8N2H4 156 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 CELF2-AS1Q8N7Q2 184 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 OR52I1Q8NGK6 324 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 CNIH3Q8TBE1 160 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 FAM168AQ92567 244 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 RORBQ92753 470 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 REEP6Q96HR9 211 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 LYZL4Q96KX0 146 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 SIGLEC11Q96RL6 698 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 PBOV1Q9GZY1 135 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 AMBNQ9NP70 447 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 IKZF2Q9UKS7 526 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 MYRFQ9Y2G1 1151 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 ZANQ9Y493 2812 aa14.37□□□□□ -0.11
SCAF11-206ENST00000474828 IGHV4-30-2A0A087WSY4 118 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 TTRP02766 147 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
SCAF11-206ENST00000474828 CCL1P22362 96 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 GSK3AP49840 483 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 CCL8P80075 99 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 MFGE8Q08431 387 aaPredicted RBP14.36□□□□□ -0.11
SCAF11-206ENST00000474828 CATSPERDQ86XM0 798 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 YIPF5Q969M3 257 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 PGAM5Q96HS1 289 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
SCAF11-206ENST00000474828 TBX5Q99593 518 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 RHNO1Q9BSD3 238 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 ANKRD60Q9BZ19 345 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 CHODLQ9H9P2 273 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 TMEM100Q9NV29 134 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 ERVK13-1Q9NX77 482 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 SNX5Q9Y5X3 404 aa14.36□□□□□ -0.11
SCAF11-206ENST00000474828 MED13LQ71F56 2210 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 A0A1B0GTI1 187 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 DAPL1A0PJW8 107 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 IRGMA1A4Y4 181 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 TRIM64A6NGJ6 449 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 TRIM64BA6NI03 449 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 SPRY3O43610 288 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 GMDSO60547 372 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 LIMS3P0CW19 117 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 LIMS4P0CW20 117 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 COL8A2P25067 703 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 DCKP27707 260 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 CD200P41217 278 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 GATA4P43694 442 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 HSPA13P48723 471 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 TMEM33P57088 247 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 ACTA2P62736 377 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 ACTG2P63267 376 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 TIGD6Q17RP2 521 aa14.35□□□□□ -0.11
SCAF11-206ENST00000474828 SPRNQ5BIV9 151 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms