RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 LINC00854A0A1B0GVQ3 168 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 CNOT4O95628 575 aaKnown RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 ADRB1P08588 477 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 PTGER4P35408 488 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 THBS4P35443 961 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 C2orf76Q3KRA6 126 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 FAM166AQ6J272 317 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 Q6ZT83 130 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 OR52N4Q8NGI2 321 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 OR2AE1Q8NHA4 323 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 NKX3-1Q99801 234 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 PIGLQ9Y2B2 252 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 LOC390937A0A1W2PQ73 354 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 CIB4A0PJX0 185 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 MBD3L4A6NDZ8 208 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 MBD3L3A6NE82 208 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 MBD3L5A6NJ08 208 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 HCKP08631 526 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 ARSBP15848 533 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 STOMP27105 288 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 CAPZA1P52907 286 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 GSG1Q2KHT4 349 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 TBRG1Q3YBR2 411 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 C1orf100Q5SVJ3 147 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 ZNF529Q6P280 563 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 VWA1Q6PCB0 445 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 CD163Q86VB7 1156 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 SEMA6DQ8NFY4 1073 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 MBD3L2Q8NHZ7 208 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 PP6455Q8WZ26 134 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 HAVCR1Q96D42 359 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 RGCCQ9H4X1 137 aa17.24■□□□□ 0.35
SSR1-204ENST00000474597 METTL17Q9H7H0 456 aaPredicted RBP17.24■□□□□ 0.35
SSR1-204ENST00000474597 C5orf49A4QMS7 147 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 ZNF503-AS2A6NEH8 195 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 XRCC2O43543 280 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 CD37P11049 281 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 IGHV1-2P23083 117 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 RANBP1P43487 201 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 UBE2NP61088 152 aaKnown RBP17.23■□□□□ 0.35
SSR1-204ENST00000474597 C1orf185Q5T7R7 199 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 CISD2Q8N5K1 135 aaKnown RBP17.23■□□□□ 0.35
SSR1-204ENST00000474597 AKAP1Q92667 903 aaKnown RBP eCLIP17.23■□□□□ 0.354e-13■□□□□ 8.6
SSR1-204ENST00000474597 PHF21AQ96BD5 680 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 ZFP3Q96NJ6 502 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 ABHD1Q96SE0 405 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 UQCC2Q9BRT2 126 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 C1QTNF5Q9BXJ0 243 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 TBC1D24Q9ULP9 559 aa17.23■□□□□ 0.35
SSR1-204ENST00000474597 RAD51DO75771 328 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 FAM87AP0C7U9 286 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 FAHP16930 419 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 APLNRP35414 380 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 ZNF93P35789 620 aaPredicted RBP17.22■□□□□ 0.35
SSR1-204ENST00000474597 TMEM69Q5SWH9 247 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 Q6ZSR3 168 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 IZUMO1Q8IYV9 350 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 SLC25A28Q96A46 364 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 RFT1Q96AA3 541 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 NOX3Q9HBY0 568 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
SSR1-204ENST00000474597 MGAQ8IWI9 3026 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 LOC100509620A0A075B734 347 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 DHRS7CA6NNS2 312 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 LYZL6O75951 148 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 IL2RAP01589 272 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 TMIGD3P0DMS9 266 aaPredicted RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 MAP2K3P46734 347 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 FOXF2Q12947 444 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 ZNF324BQ6AW86 544 aaPredicted RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 CCDC36Q8IYA8 594 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 FAM57AQ8TBR7 257 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 THAP7Q9BT49 309 aaPredicted RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 CNTD2Q9H8S5 307 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 PLSCR4Q9NRQ2 329 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 TMEM272A0A1B0GTI8 110 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 HLA-DQB1P01920 261 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 CDK2P24941 298 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 MMP15P51511 669 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 RIPPLY1Q0D2K3 151 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 ASAH1Q13510 395 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 ZNF57Q68EA5 555 aaPredicted RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 OR5AS1Q8N127 324 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 Q8NA96 180 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 OR4D6Q8NGJ1 314 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 SNRNP27Q8WVK2 155 aaKnown RBP17.21■□□□□ 0.35
SSR1-204ENST00000474597 DIABLOQ9NR28 239 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 B3GNT2Q9NY97 397 aa17.21■□□□□ 0.35
SSR1-204ENST00000474597 EEF1E1O43324 174 aaKnown RBP17.2■□□□□ 0.34
SSR1-204ENST00000474597 ALDOBP05062 364 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 CRHP06850 196 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 CCL2P13500 99 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 HOXC12P31275 282 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 UTS2BQ765I0 119 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 MDP1Q86V88 176 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 LYPD6Q86Y78 171 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 CDH26Q8IXH8 852 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 C15orf40Q8WUR7 153 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 GPER1Q99527 375 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms