RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PRSS56P0CW18 603 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 FGF9P31371 208 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 OR3A4PP47883 348 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 RAB5CP51148 216 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GEMP55040 296 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PIGPP57054 158 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 TMPRSS3P57727 454 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CDK3Q00526 305 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PSG6Q00889 435 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CRYZQ08257 329 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF415Q09FC8 603 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF846Q147U1 533 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 KIR2DS1Q14954 304 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 RTP5Q14D33 572 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 EIF4HQ15056 248 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GUCA2BQ16661 112 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 NKPD1Q17RQ9 610 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PARP15Q460N3 678 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CLLU1Q5K131 121 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 NCMAPQ5T1S8 102 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 KIAA0895LQ68EN5 471 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM166AQ6J272 317 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF782Q6ZMW2 699 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MON1BQ7L1V2 547 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CHSY1Q86X52 802 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 VRK3Q8IV63 474 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 LRRC25Q8N386 305 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 Q8WTZ3 238 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ORAOV1Q8WV07 137 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ISL2Q96A47 359 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CLDN23Q96B33 292 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GPR22Q99680 433 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 C1orf50Q9BV19 199 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PECRQ9BY49 303 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SSU72Q9NP77 194 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GKN1Q9NS71 199 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 JKAMPQ9P055 326 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MARCH2Q9P0N8 246 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 LHX3Q9UBR4 397 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SAMD4AQ9UPU9 718 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PSG8Q9UQ74 426 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 YARS2Q9Y2Z4 477 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 HIVEP3Q5T1R4 2406 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 CLDN24A6NM45 220 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 A8MWP6 167 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 MSH4O15457 936 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 TFAP2AP05549 437 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 HIST1H2AGP0C0S8 130 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 OR56A5P0C7T3 313 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 UNGP13051 313 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF17P17021 662 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 TAL1P17542 331 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 CBLP22681 906 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 ADORA2BP29275 332 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 SULT1A1P50225 295 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 SULT1A2P50226 295 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 METAP2P50579 478 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 PRKCDQ05655 676 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 GPR17Q13304 367 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 C1orf61Q13536 156 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 CCNIQ14094 377 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 AVPI1Q5T686 147 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 XP32Q5T750 250 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 LYPLAL1Q5VWZ2 237 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 MFSD12Q6NUT3 480 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 STEAP1BQ6NZ63 245 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 TEX261Q6UWH6 196 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 Q6ZSR9 355 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 TPRG1Q6ZUI0 275 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 MEPCEQ7L2J0 689 aaKnown RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 LINC01551Q86U37 167 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 LDLRAD3Q86YD5 345 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 DOLPP1Q86YN1 238 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 GALNT16Q8N428 558 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 PACRGLQ8N7B6 248 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF676Q8N7Q3 588 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 OR6F1Q8NGZ6 308 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 HIST1H2ACQ93077 130 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 OR7D2Q96RA2 312 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 NODALQ96S42 347 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 PATZ1Q9HBE1 687 aaKnown RBP5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 CDH20Q9HBT6 801 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 SLCO1B3Q9NPD5 702 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 STEAP1Q9UHE8 339 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 SIGLEC9Q9Y336 463 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 SAR1BQ9Y6B6 198 aa5.34□□□□□ -1.55
SMARCE1-208ENST00000474246 CDHR4A6H8M9 788 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TMEM150BA6NC51 233 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FAM181BA6NEQ2 426 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 C3orf70A6NLC5 250 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 H7C417 338 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FGF10O15520 208 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ORC5O43913 435 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FOXH1O75593 365 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CRYAAP02489 173 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 PAEPP09466 180 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms