RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 DDOSTP39656 456 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 OPRL1P41146 370 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 DAPP51397 102 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 PTGES3Q15185 160 aaKnown RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 ATP6AP1Q15904 470 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SNAPC1Q16533 368 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 KRTAP24-1Q3LI83 254 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SLC35D3Q5M8T2 416 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 PRSS45Q7RTY3 260 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 KLBQ86Z14 1044 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 PARP8Q8N3A8 854 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SPERTQ8NA61 448 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 BBS1Q8NFJ9 593 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 OR52H1Q8NGJ2 320 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 OTOSQ8NHW6 89 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 Q8TCH9 128 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 THEM6Q8WUY1 208 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 SGK3Q96BR1 496 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 AMELYQ99218 206 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 TVP23BQ9NYZ1 205 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 DYSFO75923 2080 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 TANC2Q9HCD6 1990 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 LOC105371242A0A075B767 164 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 CEACAM18A8MTB9 384 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 F5H0A9 414 aaPredicted RBP9.38□□□□□ -0.91
CKS1B-206ENST00000474215 G3V2T6 193 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 TBX1O43435 398 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 SELENOFO60613 162 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 LYNP07948 512 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 IRF2P14316 349 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 SLC2A5P22732 501 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 FASP25445 335 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 SEC61A1P61619 476 aaKnown RBP9.38□□□□□ -0.91
CKS1B-206ENST00000474215 RPS7P62081 194 aaKnown RBP9.38□□□□□ -0.91
CKS1B-206ENST00000474215 ESRRGP62508 458 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 MPPED2Q15777 294 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 TIGD6Q17RP2 521 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 SLC16A9Q7RTY1 509 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 PLPP7Q8NBV4 271 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 OR56B2PQ8NGI1 322 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 OR11L1Q8NGX0 322 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 NANPQ8TBE9 248 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 DUS3LQ96G46 650 aaKnown RBP9.38□□□□□ -0.91
CKS1B-206ENST00000474215 TEAD3Q99594 435 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 TMEM246Q9BRR3 403 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 ADAT1Q9BUB4 502 aaKnown RBP9.38□□□□□ -0.91
CKS1B-206ENST00000474215 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 UFSP2Q9NUQ7 469 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 DNAJC27Q9NZQ0 273 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 MIOXQ9UGB7 285 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 OPN4Q9UHM6 478 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 PPIAL4AQ9Y536 164 aa9.38□□□□□ -0.91
CKS1B-206ENST00000474215 A0A0A6YYJ9 748 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ANKRD30BLA7E2S9 258 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 A8MXK9 166 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 TRAPPC2LH3BP13 241 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 MITFO75030 526 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 FAM20BO75063 409 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 PTBP3O95758 552 aaKnown RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ALOX5APP20292 161 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 CFL1P23528 166 aaKnown RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 NAA10P41227 235 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF121P58317 390 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-206ENST00000474215 FAM3AP98173 230 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 MZT1Q08AG7 82 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 APOFQ13790 326 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF404Q494X3 552 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 FAM201AQ5SY85 155 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 PRAMEF6Q5VXH4 476 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ZDHHC13Q8IUH4 622 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 REEP6Q96HR9 211 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 PGAM5Q96HS1 289 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 C19orf24Q9BVV8 132 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 YIPF3Q9GZM5 350 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 OR10A2Q9H208 303 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 BRD7Q9NPI1 651 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 MMP26Q9NRE1 261 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 KRT84Q9NSB2 600 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 C14orf119Q9NWQ9 140 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF319Q9P2F9 582 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 RNF7Q9UBF6 113 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 LRCH1Q9Y2L9 728 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 KLHDC2Q9Y2U9 406 aa9.37□□□□□ -0.91
CKS1B-206ENST00000474215 CIB2O75838 187 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 GRPP07492 148 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 FCGR1AP12314 374 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 RPS2P15880 293 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms