RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SFTPDP35247 375 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CASRP41180 1078 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 HTR2BP41595 481 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TSPAN7P41732 249 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CSNK1A1P48729 337 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 EFNA3P52797 238 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TSPAN5P62079 268 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 GALK2Q01415 458 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 MC2RQ01718 297 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 HGFACQ04756 655 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 FMODQ06828 376 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 SPOCK1Q08629 439 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ETFDHQ16134 617 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF239Q16600 458 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ST3GAL2Q16842 350 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM176BQ3YBM2 270 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 C4orf46Q504U0 113 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ACTBL2Q562R1 376 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 DCAF12Q5T6F0 453 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CARD17Q5XLA6 110 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 RTL6Q6ICC9 239 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 STEAP1BQ6NZ63 245 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 LPCAT3Q6P1A2 487 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 MTFR2Q6P444 385 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TSSK4Q6SA08 328 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 Q6ZSN1 163 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMPPEQ6ZT21 453 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 DOK3Q7L591 496 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OR2W3Q7Z3T1 314 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 LINC00346Q8IVM7 164 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ELMOD2Q8IZ81 293 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC7A5P1Q8MH63 180 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 BCL6BQ8N143 479 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 KDM8Q8N371 416 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 GTPBP8Q8N3Z3 284 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF283Q8N7M2 679 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 FADS6Q8N9I5 356 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM229BQ8NBD8 167 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CHST4Q8NCG5 386 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OR11H7Q8NGC8 314 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OR51A4Q8NGJ6 313 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OR2Y1Q8NGV0 311 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OR2T35Q8NGX2 323 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ST7LQ8TDW4 575 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 KCNE4Q8WWG9 221 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 SPTSSAQ969W0 71 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ORAI1Q96D31 301 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 JSRP1Q96MG2 331 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 SCGB3A2Q96PL1 93 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 AMELYQ99218 206 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 S100A13Q99584 98 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 WDR77Q9BQA1 342 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 NUDT16L1Q9BRJ7 211 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 UTP23Q9BRU9 249 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 URM1Q9BTM9 101 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 PBOV1Q9GZY1 135 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM185BQ9H7F4 350 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 METTL17Q9H7H0 456 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM165Q9HC07 324 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 G6PC2Q9NQR9 355 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 OCIAD1Q9NX40 245 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 MED29Q9NX70 200 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 B3GNT2Q9NY97 397 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 KLHL13Q9P2N7 655 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 EIF3KQ9UBQ5 218 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 KLK11Q9UBX7 282 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CFAP54Q96N23 3096 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 BRWD1Q9NSI6 2320 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 LY6G6EA0A0G2JKS1 128 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PMS2P1A4D2B8 440 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 TUBAL3A6NHL2 446 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 H3BSH0 61 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 L7N2F9 121 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 NTN3O00634 580 aaPredicted RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 RAD1O60671 282 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CBR3O75828 277 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 MPZL1O95297 269 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PNPP00491 289 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ALDOBP05062 364 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 HCKP08631 526 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ITGA5P08648 1049 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 QDPRP09417 244 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PGA4P0DJD7 388 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PGA3P0DJD8 388 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 LIFP15018 202 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 IL11P20809 199 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 MSR1P21757 451 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 AGTR1P30556 359 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 MAGEB1P43366 347 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CBX5P45973 191 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CX3CR1P49238 355 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF81P51508 661 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CLDN17P56750 224 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 TAS2R31P59538 309 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 LSM6P62312 80 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 RPS15P62841 145 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 FGL1Q08830 312 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PMPCAQ10713 525 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ECH1Q13011 328 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms