RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 DYRK2Q92630 601 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 C12orf43Q96C57 262 aaKnown RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 TOR3AQ9H497 397 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 GGT3PA6NGU5 568 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ARPC2O15144 300 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 SNX3O60493 162 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 FMO3P31513 532 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
CHD3-209ENST00000473376 MAGEA2P43356 314 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 GRB2P62993 217 aaKnown RBP11.23□□□□□ -0.61
CHD3-209ENST00000473376 SNAI3Q3KNW1 292 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 METTL11BQ5VVY1 283 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ZNF770Q6IQ21 691 aaPredicted RBP11.23□□□□□ -0.61
CHD3-209ENST00000473376 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 CYB561A3Q8NBI2 242 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 PROKR2Q8NFJ6 384 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 OR52H1Q8NGJ2 320 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 WDFY2Q96P53 400 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
CHD3-209ENST00000473376 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 UFSP2Q9NUQ7 469 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 ACOXLQ9NUZ1 547 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 KPTNQ9Y664 436 aa11.23□□□□□ -0.61
CHD3-209ENST00000473376 CENPVL3A0A0U1RRI6 287 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 CLPSL1A2RUU4 121 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 ZNF878C9JN71 531 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 KNG1P01042 644 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 MDKP21741 143 aaPredicted RBP11.22□□□□□ -0.61
CHD3-209ENST00000473376 ENTPD1P49961 510 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 MNAT1P51948 309 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 RAG2P55895 527 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 OR8B8Q15620 311 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 PRAMEF6Q5VXH4 476 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 LDLRAD3Q86YD5 345 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 ARHGAP24Q8N264 748 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 GCSAMQ8N6F7 178 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 RNF148Q8N7C7 305 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 WFDC12Q8WWY7 111 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 TBX15Q96SF7 602 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 COPS4Q9BT78 406 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 MUC13Q9H3R2 512 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 MAGIXQ9H6Y5 334 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 ABCB9Q9NP78 766 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 LYVE1Q9Y5Y7 322 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 COMMD3-BMI1R4GMX3 469 aa11.22□□□□□ -0.61
CHD3-209ENST00000473376 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 ADAM20O43506 726 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 MELTFP08582 738 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 MICBQ29980 383 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CDONQ4KMG0 1287 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 GLYATL3Q5SZD4 288 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 SLC35F1Q5T1Q4 408 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 ATPAF1Q5TC12 328 aaPredicted RBP11.21□□□□□ -0.61
CHD3-209ENST00000473376 C16orf89Q6UX73 402 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CD300LDQ6UXZ3 194 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 C17orf107Q6ZR85 190 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 FTMTQ8N4E7 242 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 SLC37A3Q8NCC5 494 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 LY6G5BQ8NDX9 201 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CSNK2A3Q8NEV1 391 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 OR2T33Q8NG76 320 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 SLAMF6Q96DU3 332 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CDRT15Q96T59 188 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CITED1Q99966 193 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 PCGF1Q9BSM1 259 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 DGCR6LQ9BY27 220 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 TLNRD1Q9H1K6 362 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 MMADHCQ9H3L0 296 aaPredicted RBP11.21□□□□□ -0.61
CHD3-209ENST00000473376 EGLN3Q9H6Z9 239 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CNTD2Q9H8S5 307 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 ACTR3BQ9P1U1 418 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 ZNF391Q9UJN7 358 aa11.21□□□□□ -0.61
CHD3-209ENST00000473376 CAB39Q9Y376 341 aaPredicted RBP11.21□□□□□ -0.61
CHD3-209ENST00000473376 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.62
CHD3-209ENST00000473376 IGHV3OR16-10A0A075B7F0 116 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 IGHV3-64DA0A0J9YX35 117 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 A0A1B0GVI7 797 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 TNFRSF11BO00300 401 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 ZNF593O00488 134 aaPredicted RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 TIMM23O14925 209 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 KCNAB3O43448 404 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 GASTP01350 101 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms