RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 G6PC2Q9NQR9 355 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 TVP23BQ9NYZ1 205 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 AP4S1Q9Y587 144 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 ANKRD30BLA7E2S9 258 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 G3V2T6 193 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 GMDSO60547 372 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 DDOSTP39656 456 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 GATA4P43694 442 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 ESRRGP62508 458 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
MRPL55-226ENST00000473066 APOFQ13790 326 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 SNCBQ16143 134 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 TMEM236Q5W0B7 351 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 FAM57BQ71RH2 274 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 RHOUQ7L0Q8 258 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 ZDHHC13Q8IUH4 622 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 OTOSQ8NHW6 89 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 UTP4Q969X6 686 aaKnown RBP13.12□□□□□ -0.31
MRPL55-226ENST00000473066 REEP6Q96HR9 211 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 FN3KRPQ9HA64 309 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 NTN4Q9HB63 628 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 BRD7Q9NPI1 651 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 UFSP2Q9NUQ7 469 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 OR5V1Q9UGF6 321 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 LAMP5Q9UJQ1 280 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
MRPL55-226ENST00000473066 PPIAL4EA0A075B759 164 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 A6NLC8 198 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 CEACAM18A8MTB9 384 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 PPIAL4DF5H284 164 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 PPIAL4FP0DN26 164 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-226ENST00000473066 PRAMEF6Q5VXH4 476 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 NLRC3Q7RTR2 1065 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 KRT77Q7Z794 578 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 FTMTQ8N4E7 242 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 NIPAL2Q9H841 368 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 C14orf119Q9NWQ9 140 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
MRPL55-226ENST00000473066 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 PPIAL4CA0A0B4J2A2 164 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 F5H0A9 414 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 FAM20BO75063 409 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF205O95201 554 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 CPT2P23786 658 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 GNALP38405 381 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 OPRL1P41146 370 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 DAPP51397 102 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 KCNJ8Q15842 424 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 CCDC121Q6ZUS5 278 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 CSNK2A3Q8NEV1 391 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 Q8TCH9 128 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 DVL3Q92997 716 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 NEIL1Q96FI4 390 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 AMELYQ99218 206 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 MRI1Q9BV20 369 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 GABARAPL1Q9H0R8 117 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 C7orf69Q9H7B7 122 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-226ENST00000473066 RNF7Q9UBF6 113 aa13.1□□□□□ -0.31
MRPL55-226ENST00000473066 hCG_1807616A0A1W2PRN6 198 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 C5orf63A6NC05 138 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 A8MXK9 166 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 EPHA1P21709 976 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 SLC2A5P22732 501 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
MRPL55-226ENST00000473066 GNB2P62879 340 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 MAB21L1Q13394 359 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 AMIGO2Q86SJ2 522 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 BOLLQ8N9W6 283 aaKnown RBP13.09□□□□□ -0.31
MRPL55-226ENST00000473066 PLPP7Q8NBV4 271 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 NANPQ8TBE9 248 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 CNN2Q99439 309 aaKnown RBP13.09□□□□□ -0.31
MRPL55-226ENST00000473066 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-226ENST00000473066 YIPF3Q9GZM5 350 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 TRIM36Q9NQ86 728 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 TMEM14AQ9Y6G1 99 aa13.09□□□□□ -0.31
MRPL55-226ENST00000473066 COL6A5A8TX70 2615 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms