RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR5AS1Q8N127 324 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 STX19Q8N4C7 294 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 BPIFB6Q8NFQ5 453 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 OR2T27Q8NH04 317 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 CNIH3Q8TBE1 160 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
TPM3-216ENST00000473036 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 CNN2Q99439 309 aaKnown RBP11.14□□□□□ -0.63
TPM3-216ENST00000473036 SOX7Q9BT81 388 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 REG4Q9BYZ8 158 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 MS4A5Q9H3V2 200 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 CACNG2Q9Y698 323 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 RNF212BA8MTL3 300 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 H0YL77 283 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 J3QRE1 110 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 SLC1A7O00341 560 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 MLNRO43193 412 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 SPRY3O43610 288 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 RP2O75695 350 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 RAC2P15153 192 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 MYL12AP19105 171 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 CRHBPP24387 322 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 EEF1B2P24534 225 aaKnown RBP11.13□□□□□ -0.63
TPM3-216ENST00000473036 SLC6A9P48067 706 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 ZNF81P51508 661 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 ZNF121P58317 390 aaPredicted RBP11.13□□□□□ -0.63
TPM3-216ENST00000473036 RIN1Q13671 783 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 TSTQ16762 297 aaKnown RBP11.13□□□□□ -0.63
TPM3-216ENST00000473036 RNLSQ5VYX0 342 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 KCTD20Q7Z5Y7 419 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 SLC35F2Q8IXU6 374 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 OR51G2Q8NGK0 314 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 PPP1R14AQ96A00 147 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 SGK3Q96BR1 496 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 RNFT2Q96EX2 444 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
TPM3-216ENST00000473036 DCAF16Q9NXF7 216 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 LAMP5Q9UJQ1 280 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 EXOGQ9Y2C4 368 aaKnown RBP11.13□□□□□ -0.63
TPM3-216ENST00000473036 LRP12Q9Y561 859 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 PCDHGB5Q9Y5G0 923 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 N6AMT1Q9Y5N5 214 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 DYSFO75923 2080 aa11.13□□□□□ -0.63
TPM3-216ENST00000473036 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TIMM8AO60220 97 aaPredicted RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 SRSF10O75494 262 aaKnown RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 PNPP00491 289 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 ADH4P08319 380 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TACSTD2P09758 323 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TUBG1P23258 451 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 SLC15A1P46059 708 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 SELENOVP59797 346 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 GRB2P62993 217 aaKnown RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 ROM1Q03395 351 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 ZNF91Q05481 1191 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TAF13Q15543 124 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 ZNF684Q5T5D7 378 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 KCTD18Q6PI47 426 aaPredicted RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 UNQ6126/PRO20091Q6UXV3 157 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 PLEKHG7Q6ZR37 379 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 FAM57BQ71RH2 274 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 ACBD7Q8N6N7 88 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 ZNF283Q8N7M2 679 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 BHLHE23Q8NDY6 225 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 FAM168AQ92567 244 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 SPSB4Q96A44 273 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 JAM3Q9BX67 310 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 VCX3AQ9NNX9 186 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TUBG2Q9NRH3 451 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 NKIRAS2Q9NYR9 191 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 UBAP1Q9NZ09 502 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 MRM2Q9UI43 246 aaKnown RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 FBXO9Q9UK97 447 aaPredicted RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
TPM3-216ENST00000473036 SNX5Q9Y5X3 404 aa11.12□□□□□ -0.63
TPM3-216ENST00000473036 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 MAGEA13PA6NCF6 341 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 PTGES3LE9PB15 166 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 WNT9BO14905 357 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 RGS10O43665 173 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 CDC14BO60729 498 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 APOC1P02654 83 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
TPM3-216ENST00000473036 H2BFMP0C1H6 154 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 SELEP16581 610 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 GIFP27352 417 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 NR4A2P43354 598 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms